RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
COL4A1-205ENST00000615732 PPP6R2O75170 966 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 CFBP00751 764 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 GH1P01241 217 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 IQCF3P0C7M6 154 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 ACTN1P12814 892 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 XRCC6P12956 609 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL4A1-205ENST00000615732 TAP1Q03518 808 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 FAM160A1Q05DH4 1040 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 NR5A1Q13285 461 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 SLC39A14Q15043 492 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 PTGISQ16647 500 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 AAK1Q2M2I8 961 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 ADALQ6DHV7 355 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 HEATR3Q7Z4Q2 680 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 HERC6Q8IVU3 1022 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 FAM177A1Q8N128 213 aaPredicted RBP12.16□□□□□ -0.46
COL4A1-205ENST00000615732 OXER1Q8TDS5 423 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 NSUN6Q8TEA1 469 aaKnown RBP12.16□□□□□ -0.46
COL4A1-205ENST00000615732 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
COL4A1-205ENST00000615732 ARNTL2Q8WYA1 636 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 DHX38Q92620 1227 aaKnown RBP12.16□□□□□ -0.46
COL4A1-205ENST00000615732 KAT2BQ92831 832 aa12.16□□□□□ -0.46
COL4A1-205ENST00000615732 B4DLN1 442 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 OPLAHO14841 1288 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 KPNA6O60684 536 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 PPP1R11O60927 126 aaPredicted RBP12.15□□□□□ -0.46
COL4A1-205ENST00000615732 NR1I2O75469 434 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 BMP15O95972 392 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 CCDC192P0DO97 292 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 ATP2B1P20020 1258 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
COL4A1-205ENST00000615732 MRPL12P52815 198 aaKnown RBP12.15□□□□□ -0.46
COL4A1-205ENST00000615732 BFSP2Q13515 415 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 STXBP2Q15833 593 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 TET1Q8NFU7 2136 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 IL31RAQ8NI17 732 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 PHOSPHO2Q8TCD6 241 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 GPKOWQ92917 476 aaPredicted RBP eCLIP12.15□□□□□ -0.46
COL4A1-205ENST00000615732 FAM122AQ96E09 287 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 C1QTNF1Q9BXJ1 281 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 RBSNQ9H1K0 784 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 PXMP2Q9NR77 195 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 MRPL11Q9Y3B7 192 aaKnown RBP12.15□□□□□ -0.46
COL4A1-205ENST00000615732 MRVI1Q9Y6F6 885 aa12.15□□□□□ -0.46
COL4A1-205ENST00000615732 BAZ2BQ9UIF8 2168 aaKnown RBP12.15□□□□□ -0.47
COL4A1-205ENST00000615732 LCHNA4D1U4 455 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 LPXNO60711 386 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 CUTAO60888 179 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 HOXA13P31271 388 aaPredicted RBP12.14□□□□□ -0.47
COL4A1-205ENST00000615732 NAPAP54920 295 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 PTPN11Q06124 597 aaPredicted RBP12.14□□□□□ -0.47
COL4A1-205ENST00000615732 GRB10Q13322 594 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 PTPAQ15257 358 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 CAMK4Q16566 473 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 TCTN1Q2MV58 587 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 WWC2Q6AWC2 1192 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 GALNT17Q6IS24 598 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 LRRC8DQ7L1W4 858 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 MCF2L2Q86YR7 1114 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 BLIDQ8IZY5 108 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
COL4A1-205ENST00000615732 GOLPH3LQ9H4A5 285 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 HDAC6Q9UBN7 1215 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 COG5Q9UP83 839 aa12.14□□□□□ -0.47
COL4A1-205ENST00000615732 hCG_1984214I3L0E3 225 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 TLL1O43897 1013 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 BAIAP3O94812 1187 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 NR3C2P08235 984 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 MYCLP12524 364 aaPredicted RBP12.13□□□□□ -0.47
COL4A1-205ENST00000615732 CMA1P23946 247 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 KCNJ6P48051 423 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 PSEN2P49810 448 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 WDR5P61964 334 aaKnown RBP12.13□□□□□ -0.47
COL4A1-205ENST00000615732 DEFB103AP81534 67 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 MFSD10Q14728 455 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 GPNMBQ14956 572 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 DGKDQ16760 1214 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 SLC35G1Q2M3R5 365 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 TTC38Q5R3I4 469 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 SASS6Q6UVJ0 657 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 CCDC155Q8N6L0 562 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 ZNF713Q8N859 430 aaPredicted RBP12.13□□□□□ -0.47
COL4A1-205ENST00000615732 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
COL4A1-205ENST00000615732 RNF214Q8ND24 703 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 GDPD5Q8WTR4 605 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 KHSRPQ92945 711 aaKnown RBP eCLIP12.13□□□□□ -0.47
COL4A1-205ENST00000615732 WNT8BQ93098 351 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 IWS1Q96ST2 819 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 AMNQ9BXJ7 453 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 EPHX3Q9H6B9 360 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 BARHL2Q9NY43 387 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 GTF2IRD1Q9UHL9 959 aa12.13□□□□□ -0.47
COL4A1-205ENST00000615732 DDX41Q9UJV9 622 aaKnown RBP12.13□□□□□ -0.47
COL4A1-205ENST00000615732 PCDHA4Q9UN74 947 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms