RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 GPKOWQ92917 476 aaPredicted RBP eCLIP8.07□□□□□ -1.12
MUC1-227ENST00000615517 SPATA33Q96N06 139 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 IWS1Q96ST2 819 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 RMDN3Q96TC7 470 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 TUT1Q9H6E5 874 aaKnown RBP8.07□□□□□ -1.12
MUC1-227ENST00000615517 AGO3Q9H9G7 860 aaKnown RBP8.07□□□□□ -1.12
MUC1-227ENST00000615517 HCSTQ9UBK5 93 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 SPEGQ15772 3267 aa8.07□□□□□ -1.12
MUC1-227ENST00000615517 BAZ2BQ9UIF8 2168 aaKnown RBP8.06□□□□□ -1.12
MUC1-227ENST00000615517 FSD2A1L4K1 749 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 PATL2C9JE40 543 aaKnown RBP8.06□□□□□ -1.12
MUC1-227ENST00000615517 EIF3JO75822 258 aaKnown RBP8.06□□□□□ -1.12
MUC1-227ENST00000615517 FGF18O76093 207 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 GGPS1O95749 300 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 NR3C2P08235 984 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 SP9P0CG40 484 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 HOXB8P17481 243 aaPredicted RBP8.06□□□□□ -1.12
MUC1-227ENST00000615517 PPARAQ07869 468 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 FBXO47Q5MNV8 452 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 PLPP4Q5VZY2 271 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 KANK3Q6NY19 840 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 NPAS4Q8IUM7 802 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 SIX5Q8N196 739 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 LMBR1Q8WVP7 490 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 CHAMP1Q96JM3 812 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 ADAM7Q9H2U9 754 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 TELO2Q9Y4R8 837 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 GCN1Q92616 2671 aaKnown RBP8.06□□□□□ -1.12
MUC1-227ENST00000615517 DOCK6Q96HP0 2047 aa8.06□□□□□ -1.12
MUC1-227ENST00000615517 FLNBO75369 2602 aaKnown RBP8.06□□□□□ -1.12
MUC1-227ENST00000615517 IGF2RP11717 2491 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 KRBA1A5PL33 1030 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 TSPY2A6NKD2 308 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 SPDYE4A6NLX3 237 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 APPP05067 770 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 SRGAP2BP0DMP2 458 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 PDHBP11177 359 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 RLBP1P12271 317 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 UBA1P22314 1058 aaKnown RBP8.05□□□□□ -1.12
MUC1-227ENST00000615517 CD52P31358 61 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 ARHGAP4P98171 946 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 CTDSPL2Q05D32 466 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 COL9A3Q14050 684 aaPredicted RBP8.05□□□□□ -1.12
MUC1-227ENST00000615517 HSP90AB4PQ58FF6 505 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 PPP4R3BQ5MIZ7 849 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 ARHGEF16Q5VV41 709 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 TDRD5Q8NAT2 981 aaKnown RBP8.05□□□□□ -1.12
MUC1-227ENST00000615517 APPBP2Q92624 585 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 KIF1BPQ96EK5 621 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 ZFP91Q96JP5 570 aaPredicted RBP8.05□□□□□ -1.12
MUC1-227ENST00000615517 NECTIN4Q96NY8 510 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 TMEM47Q9BQJ4 181 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 CPVLQ9H3G5 476 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 PXMP2Q9NR77 195 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 AAASQ9NRG9 546 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 TMEM260Q9NX78 707 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 DLGAP2Q9P1A6 1054 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 PNMA2Q9UL42 364 aa8.05□□□□□ -1.12
MUC1-227ENST00000615517 POTEMA6NI47 508 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 ANP32CO43423 234 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 NARSO43776 548 aaKnown RBP8.04□□□□□ -1.12
MUC1-227ENST00000615517 GNAT2P19087 354 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 SDHBP21912 280 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 TGM1P22735 817 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 ITIH3Q06033 890 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 ZNF543Q08ER8 600 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 PDE12Q6L8Q7 609 aaKnown RBP8.04□□□□□ -1.12
MUC1-227ENST00000615517 CES5AQ6NT32 575 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 POTEGQ6S5H5 508 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 TSHZ1Q6ZSZ6 1077 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 TRIM50Q86XT4 487 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 MAML2Q8IZL2 1156 aaPredicted RBP8.04□□□□□ -1.12
MUC1-227ENST00000615517 C12orf76Q8N812 135 aaPredicted RBP8.04□□□□□ -1.12
MUC1-227ENST00000615517 COLGALT1Q8NBJ5 622 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 CASP10Q92851 521 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 RTKNQ9BST9 563 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 CYP26B1Q9NR63 512 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 SH2B1Q9NRF2 756 aaPredicted RBP8.04□□□□□ -1.12
MUC1-227ENST00000615517 DUSP12Q9UNI6 340 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 PCDHB12Q9Y5F1 795 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 HCFC2Q9Y5Z7 792 aa8.04□□□□□ -1.12
MUC1-227ENST00000615517 MYH15Q9Y2K3 1946 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 COL4A3Q01955 1670 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 OPLAHO14841 1288 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 FOXP2O15409 715 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 RNF113AO15541 343 aaKnown RBP8.03□□□□□ -1.12
MUC1-227ENST00000615517 RANBP6O60518 1105 aaKnown RBP8.03□□□□□ -1.12
MUC1-227ENST00000615517 EOMESO95936 686 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 DCNP07585 359 aaKnown RBP8.03□□□□□ -1.12
MUC1-227ENST00000615517 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
MUC1-227ENST00000615517 GOLGA8HP0CJ92 632 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 SNHG28P0DPA3 235 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 TOP1P11387 765 aaKnown RBP8.03□□□□□ -1.12
MUC1-227ENST00000615517 GNAT1P11488 350 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 MYCLP12524 364 aaPredicted RBP8.03□□□□□ -1.12
MUC1-227ENST00000615517 SCG2P13521 617 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 MTHFRP42898 656 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 TDGQ13569 410 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 TPRNQ4KMQ1 711 aa8.03□□□□□ -1.12
MUC1-227ENST00000615517 SPECC1Q5M775 1068 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms