RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 RPLP2P05387 115 aaKnown RBP25.88■■□□□ 1.73
FAM228B-208ENST00000613899 CYP3A4P08684 503 aa25.88■■□□□ 1.73
FAM228B-208ENST00000613899 ARNTL2Q8WYA1 636 aa25.88■■□□□ 1.73
FAM228B-208ENST00000613899 PCYT2Q99447 389 aa25.88■■□□□ 1.73
FAM228B-208ENST00000613899 SLC26A6Q9BXS9 759 aa25.88■■□□□ 1.73
FAM228B-208ENST00000613899 TM6SF1Q9BZW5 370 aa25.88■■□□□ 1.73
FAM228B-208ENST00000613899 PPP4R2Q9NY27 417 aa25.88■■□□□ 1.73
FAM228B-208ENST00000613899 SIP14410 1827 aa25.88■■□□□ 1.73
FAM228B-208ENST00000613899 COL4A4P53420 1690 aaPredicted RBP25.87■■□□□ 1.73
FAM228B-208ENST00000613899 TRANK1O15050 2925 aa25.87■■□□□ 1.73
FAM228B-208ENST00000613899 RRN3P2A6NIE6 340 aa25.87■■□□□ 1.73
FAM228B-208ENST00000613899 SETQ01105 290 aaPredicted RBP25.87■■□□□ 1.73
FAM228B-208ENST00000613899 TOB2Q14106 344 aaPredicted RBP25.87■■□□□ 1.73
FAM228B-208ENST00000613899 ERICH6BQ5W0A0 696 aa25.87■■□□□ 1.73
FAM228B-208ENST00000613899 RUFY4Q6ZNE9 571 aa25.87■■□□□ 1.73
FAM228B-208ENST00000613899 PLPPR4Q7Z2D5 763 aa25.87■■□□□ 1.73
FAM228B-208ENST00000613899 PLA2G4DQ86XP0 818 aa25.87■■□□□ 1.73
FAM228B-208ENST00000613899 MYOCDQ8IZQ8 938 aa25.87■■□□□ 1.73
FAM228B-208ENST00000613899 CRYGNQ8WXF5 182 aa25.87■■□□□ 1.73
FAM228B-208ENST00000613899 TRPC6Q9Y210 931 aa25.87■■□□□ 1.73
FAM228B-208ENST00000613899 LCHNA4D1U4 455 aa25.86■■□□□ 1.73
FAM228B-208ENST00000613899 FAM86B1E9PN63 330 aa25.86■■□□□ 1.73
FAM228B-208ENST00000613899 FAM86B2P0C5J1 330 aa25.86■■□□□ 1.73
FAM228B-208ENST00000613899 POU3F3P20264 500 aaPredicted RBP25.86■■□□□ 1.73
FAM228B-208ENST00000613899 SLC26A2P50443 739 aa25.86■■□□□ 1.73
FAM228B-208ENST00000613899 CCT2P78371 535 aaKnown RBP25.86■■□□□ 1.73
FAM228B-208ENST00000613899 CCDC85BQ15834 202 aaPredicted RBP25.86■■□□□ 1.73
FAM228B-208ENST00000613899 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.86■■□□□ 1.73
FAM228B-208ENST00000613899 TRIM22Q8IYM9 498 aa25.86■■□□□ 1.73
FAM228B-208ENST00000613899 IFIH1Q9BYX4 1025 aaKnown RBP25.86■■□□□ 1.73
FAM228B-208ENST00000613899 NCOA5Q9HCD5 579 aaKnown RBP25.86■■□□□ 1.73
FAM228B-208ENST00000613899 THEGQ9P2T0 379 aa25.86■■□□□ 1.73
FAM228B-208ENST00000613899 IGLV3-22A0A075B6J6 115 aa25.85■■□□□ 1.73
FAM228B-208ENST00000613899 EPOPA6NHQ4 379 aa25.85■■□□□ 1.73
FAM228B-208ENST00000613899 ATG7O95352 703 aa25.85■■□□□ 1.73
FAM228B-208ENST00000613899 INSRRP14616 1297 aa25.85■■□□□ 1.73
FAM228B-208ENST00000613899 STAT5BP51692 787 aa25.85■■□□□ 1.73
FAM228B-208ENST00000613899 IGBP1P78318 339 aa25.85■■□□□ 1.73
FAM228B-208ENST00000613899 FAM117BQ6P1L5 589 aa25.85■■□□□ 1.73
FAM228B-208ENST00000613899 MICALL1Q8N3F8 863 aa25.85■■□□□ 1.73
FAM228B-208ENST00000613899 INSL6Q9Y581 213 aa25.85■■□□□ 1.73
FAM228B-208ENST00000613899 MARCH8Q5T0T0 291 aa25.84■■□□□ 1.73
FAM228B-208ENST00000613899 SYMPKQ92797 1274 aaKnown RBP25.84■■□□□ 1.73
FAM228B-208ENST00000613899 ZNF274Q96GC6 653 aaPredicted RBP25.84■■□□□ 1.73
FAM228B-208ENST00000613899 UPF3BQ9BZI7 483 aaKnown RBP25.84■■□□□ 1.73
FAM228B-208ENST00000613899 TSPYL2Q9H2G4 693 aaPredicted RBP25.84■■□□□ 1.73
FAM228B-208ENST00000613899 PRDM6Q9NQX0 595 aa25.84■■□□□ 1.73
FAM228B-208ENST00000613899 SH3GLB2Q9NR46 395 aa25.84■■□□□ 1.73
FAM228B-208ENST00000613899 PRRC2BQ5JSZ5 2229 aaKnown RBP25.83■■□□□ 1.73
FAM228B-208ENST00000613899 DDX39AO00148 427 aaKnown RBP25.83■■□□□ 1.73
FAM228B-208ENST00000613899 RFXAPO00287 272 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 IPO5O00410 1097 aaKnown RBP25.83■■□□□ 1.73
FAM228B-208ENST00000613899 CPLX1O14810 134 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 PPFIA3O75145 1194 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 CHRNA1P02708 482 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 MGAT3Q09327 533 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 PLCB4Q15147 1175 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 TJAP1Q5JTD0 557 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 FAM160B1Q5W0V3 765 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 DNAJB3Q8WWF6 145 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 ATXN2LQ8WWM7 1075 aaKnown RBP25.83■■□□□ 1.73
FAM228B-208ENST00000613899 TGS1Q96RS0 853 aaKnown RBP25.83■■□□□ 1.73
FAM228B-208ENST00000613899 ZNF577Q9BSK1 485 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 OSBPL7Q9BZF2 842 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 VPS54Q9P1Q0 977 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 TCEAL9Q9UHQ7 104 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 MTCH2Q9Y6C9 303 aa25.83■■□□□ 1.73
FAM228B-208ENST00000613899 IGKV6D-21A0A0A0MT36 114 aa25.82■■□□□ 1.72
FAM228B-208ENST00000613899 POTEB3A0JP26 581 aa25.82■■□□□ 1.72
FAM228B-208ENST00000613899 LINC01553A4QN01 128 aa25.82■■□□□ 1.72
FAM228B-208ENST00000613899 CCNE2O96020 404 aa25.82■■□□□ 1.72
FAM228B-208ENST00000613899 GHRP10912 638 aa25.82■■□□□ 1.72
FAM228B-208ENST00000613899 SSRP1Q08945 709 aaKnown RBP25.82■■□□□ 1.72
FAM228B-208ENST00000613899 CPLX2Q6PUV4 134 aaKnown RBP25.82■■□□□ 1.72
FAM228B-208ENST00000613899 POTEBQ6S5H4 581 aa25.82■■□□□ 1.72
FAM228B-208ENST00000613899 TBC1D22BQ9NU19 505 aa25.82■■□□□ 1.72
FAM228B-208ENST00000613899 VCANP13611 3396 aa25.82■■□□□ 1.72
FAM228B-208ENST00000613899 COL4A6Q14031 1691 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 BACH1O14867 736 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 ADAMTS3O15072 1205 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 MRPS6P82932 125 aaKnown RBP25.81■■□□□ 1.72
FAM228B-208ENST00000613899 HTRA4P83105 476 aaPredicted RBP25.81■■□□□ 1.72
FAM228B-208ENST00000613899 GRB10Q13322 594 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 MIS18BP1Q6P0N0 1132 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 ABHD15Q6UXT9 468 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 SPRED2Q7Z698 418 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 RASGRP4Q8TDF6 673 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 TOP1MTQ969P6 601 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 PDRG1Q9NUG6 133 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 CDY2AQ9Y6F7 541 aa25.81■■□□□ 1.72
FAM228B-208ENST00000613899 RBAK-RBAKDNI3L0D1 243 aa25.8■■□□□ 1.72
FAM228B-208ENST00000613899 M0QZ92 97 aa25.8■■□□□ 1.72
FAM228B-208ENST00000613899 DHX15O43143 795 aaKnown RBP25.8■■□□□ 1.72
FAM228B-208ENST00000613899 DEXIO95424 95 aa25.8■■□□□ 1.72
FAM228B-208ENST00000613899 CIITAP33076 1130 aa25.8■■□□□ 1.72
FAM228B-208ENST00000613899 NLRP5P59047 1200 aa25.8■■□□□ 1.72
FAM228B-208ENST00000613899 ERVK-21P61565 698 aa25.8■■□□□ 1.72
FAM228B-208ENST00000613899 IER5Q5VY09 327 aa25.8■■□□□ 1.72
FAM228B-208ENST00000613899 FAM49AQ9H0Q0 323 aaPredicted RBP25.8■■□□□ 1.72
FAM228B-208ENST00000613899 PCDHA2Q9Y5H9 948 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms