RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 KCTD17Q8N5Z5 321 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 ARRDC4Q8NCT1 418 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 RASSF8Q8NHQ8 419 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 ATP6V0A1Q93050 837 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 DYDC2Q96IM9 177 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 CDK5RAP3Q96JB5 506 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 MMTAG2Q9BU76 263 aaKnown RBP16.49■□□□□ 0.23
CD48-203ENST00000613788 NT5C3AQ9H0P0 336 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 SMARCAD1Q9H4L7 1026 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 ZSWIM4Q9H7M6 989 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 ZNF302Q9NR11 478 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 RGL1Q9NZL6 768 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 GABBR1Q9UBS5 961 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 TELO2Q9Y4R8 837 aa16.49■□□□□ 0.23
CD48-203ENST00000613788 KDM3AQ9Y4C1 1321 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 ADAMTS4O75173 837 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 LGR5O75473 907 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 HOXD8P13378 290 aaPredicted RBP16.48■□□□□ 0.23
CD48-203ENST00000613788 CST5P28325 142 aaPredicted RBP16.48■□□□□ 0.23
CD48-203ENST00000613788 MCM4P33991 863 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 STAT5BP51692 787 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 TPRNQ4KMQ1 711 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 UTP14CQ5TAP6 766 aaKnown RBP16.48■□□□□ 0.23
CD48-203ENST00000613788 USP49Q70CQ1 688 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 PLPPR4Q7Z2D5 763 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 TPH2Q8IWU9 490 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 AFAP1L1Q8TED9 768 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
CD48-203ENST00000613788 GLG1Q92896 1179 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 DEFB118Q96PH6 123 aa16.48■□□□□ 0.23
CD48-203ENST00000613788 PYM1Q9BRP8 204 aaKnown RBP16.48■□□□□ 0.23
CD48-203ENST00000613788 CTAGE5O15320 804 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 MED24O75448 989 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 SPATA31C1P0DKV0 1188 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 SLC26A2P50443 739 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 BEX3Q00994 111 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 CYP4A11Q02928 519 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 CTTNQ14247 550 aaKnown RBP16.47■□□□□ 0.23
CD48-203ENST00000613788 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
CD48-203ENST00000613788 HYIQ5T013 277 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 PDXDC2PQ6P474 469 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 CCDC60Q8IWA6 550 aaPredicted RBP16.47■□□□□ 0.23
CD48-203ENST00000613788 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 PCSK9Q8NBP7 692 aaKnown RBP16.47■□□□□ 0.23
CD48-203ENST00000613788 BANK1Q8NDB2 785 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 KLHDC9Q8NEP7 349 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 LXNQ9BS40 222 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 LMBRD1Q9NUN5 540 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 MAFBQ9Y5Q3 323 aaPredicted RBP16.47■□□□□ 0.23
CD48-203ENST00000613788 EMSYQ7Z589 1322 aa16.47■□□□□ 0.23
CD48-203ENST00000613788 A0A1B0GVL5 298 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 DDX11L8A8MPP1 907 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 GADD45BO75293 160 aaPredicted RBP16.46■□□□□ 0.23
CD48-203ENST00000613788 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
CD48-203ENST00000613788 LGALS2P05162 132 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 MYL3P08590 195 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 PTMSP20962 102 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 CCDC73Q6ZRK6 1079 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 C4orf19Q8IY42 314 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 PCYT2Q99447 389 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 ERAP1Q9NZ08 941 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 ZNF215Q9UL58 517 aaPredicted RBP16.46■□□□□ 0.23
CD48-203ENST00000613788 KCNH3Q9ULD8 1083 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 KIAA1024Q9UPX6 916 aa16.46■□□□□ 0.23
CD48-203ENST00000613788 FAM237AA0A1B0GTK4 181 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 MYADML2A6NDP7 307 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 LYPLA2O95372 231 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 GJB1P08034 283 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 PFKFB1P16118 471 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 CAPN2P17655 700 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 IRX5P78411 483 aaPredicted RBP16.45■□□□□ 0.22
CD48-203ENST00000613788 KARSQ15046 597 aaKnown RBP16.45■□□□□ 0.22
CD48-203ENST00000613788 LRRC41Q15345 812 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 RRAGBQ5VZM2 374 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 NACC1Q96RE7 527 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 C16orf70Q9BSU1 422 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 TSEN34Q9BSV6 310 aaKnown RBP16.45■□□□□ 0.22
CD48-203ENST00000613788 TMEM106CQ9BVX2 250 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 PANK2Q9BZ23 570 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 NRBP2Q9NSY0 501 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 DNM3Q9UQ16 869 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 IGSF9BQ9UPX0 1349 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 CENPFP49454 3210 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 DOCK5Q9H7D0 1870 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 POTEB3A0JP26 581 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 H3BRB1 525 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 SGPL1O95470 568 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 XRCC6P12956 609 aaKnown RBP eCLIP16.45■□□□□ 0.22
CD48-203ENST00000613788 PURAQ00577 322 aaKnown RBP16.45■□□□□ 0.22
CD48-203ENST00000613788 GRB10Q13322 594 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 KCNA10Q16322 511 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 UGCGQ16739 394 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 POTEBQ6S5H4 581 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 OTUD6AQ7L8S5 288 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 PDILTQ8N807 584 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 IQUBQ8NA54 791 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 FAM167AQ96KS9 214 aa16.45■□□□□ 0.22
CD48-203ENST00000613788 MTG1Q9BT17 334 aaPredicted RBP16.45■□□□□ 0.22
CD48-203ENST00000613788 KATNAL1Q9BW62 490 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms