RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 BARHL2Q9NY43 387 aa24.8■■□□□ 1.56
CBWD3-207ENST00000611426 LINC01553A4QN01 128 aa24.79■■□□□ 1.56
CBWD3-207ENST00000611426 LPXNO60711 386 aa24.79■■□□□ 1.56
CBWD3-207ENST00000611426 CPA1P15085 419 aa24.79■■□□□ 1.56
CBWD3-207ENST00000611426 ERVK-21P61565 698 aa24.79■■□□□ 1.56
CBWD3-207ENST00000611426 TAF2Q6P1X5 1199 aa24.79■■□□□ 1.56
CBWD3-207ENST00000611426 GLT8D2Q9H1C3 349 aa24.79■■□□□ 1.56
CBWD3-207ENST00000611426 ZSWIM6Q9HCJ5 1215 aa24.79■■□□□ 1.56
CBWD3-207ENST00000611426 SLC9A2Q9UBY0 812 aa24.79■■□□□ 1.56
CBWD3-207ENST00000611426 MUC3AQ02505 3323 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 ADD1P35611 737 aaKnown RBP24.78■■□□□ 1.56
CBWD3-207ENST00000611426 METAP2P50579 478 aaKnown RBP eCLIP24.78■■□□□ 1.56
CBWD3-207ENST00000611426 NEK4P51957 841 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 GRIK4Q16099 956 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 CEP55Q53EZ4 464 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 RUFY4Q6ZNE9 571 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 Q6ZUG5 572 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 GDPD5Q8WTR4 605 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 APBB2Q92870 758 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 JAKMIP1Q96N16 626 aaKnown RBP24.78■■□□□ 1.56
CBWD3-207ENST00000611426 SDF4Q9BRK5 362 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 ANO3Q9BYT9 981 aa24.78■■□□□ 1.56
CBWD3-207ENST00000611426 CCDC196A0A1B0GTZ2 297 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 TNFRSF10AO00220 468 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 PSMA5P28066 241 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 TFF2Q03403 129 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 APOBRQ0VD83 1088 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 AAK1Q2M2I8 961 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 RPAINQ86UA6 219 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 RSPH3Q86UC2 560 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 ADAMTS19Q8TE59 1207 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 IFIH1Q9BYX4 1025 aaKnown RBP24.77■■□□□ 1.56
CBWD3-207ENST00000611426 AZI2Q9H6S1 392 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 SUGCTQ9HAC7 445 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 TMEM260Q9NX78 707 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 TUBE1Q9UJT0 475 aa24.77■■□□□ 1.56
CBWD3-207ENST00000611426 CHRNA1P02708 482 aa24.76■■□□□ 1.55
CBWD3-207ENST00000611426 ARP10275 920 aa24.76■■□□□ 1.55
CBWD3-207ENST00000611426 ZNF76P36508 570 aa24.76■■□□□ 1.55
CBWD3-207ENST00000611426 HTRA4P83105 476 aaPredicted RBP24.76■■□□□ 1.55
CBWD3-207ENST00000611426 AP3B2Q13367 1082 aa24.76■■□□□ 1.55
CBWD3-207ENST00000611426 TOP1MTQ969P6 601 aa24.76■■□□□ 1.55
CBWD3-207ENST00000611426 LMCD1Q9NZU5 365 aa24.76■■□□□ 1.55
CBWD3-207ENST00000611426 NFASCO94856 1347 aa24.75■■□□□ 1.55
CBWD3-207ENST00000611426 UPP2O95045 317 aa24.75■■□□□ 1.55
CBWD3-207ENST00000611426 CLK2P49760 499 aaKnown RBP24.75■■□□□ 1.55
CBWD3-207ENST00000611426 IGBP1P78318 339 aa24.75■■□□□ 1.55
CBWD3-207ENST00000611426 PFKFB3Q16875 520 aaPredicted RBP24.75■■□□□ 1.55
CBWD3-207ENST00000611426 BLOC1S2Q6QNY1 142 aa24.75■■□□□ 1.55
CBWD3-207ENST00000611426 TNPO1Q92973 898 aaKnown RBP24.75■■□□□ 1.55
CBWD3-207ENST00000611426 BRF1Q92994 677 aa24.75■■□□□ 1.55
CBWD3-207ENST00000611426 PCYT2Q99447 389 aa24.75■■□□□ 1.55
CBWD3-207ENST00000611426 AGO4Q9HCK5 861 aaKnown RBP24.75■■□□□ 1.55
CBWD3-207ENST00000611426 COG5Q9UP83 839 aa24.75■■□□□ 1.55
CBWD3-207ENST00000611426 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.74■■□□□ 1.55
CBWD3-207ENST00000611426 MBLAC1A4D2B0 266 aaPredicted RBP24.74■■□□□ 1.55
CBWD3-207ENST00000611426 RRN3P2A6NIE6 340 aa24.74■■□□□ 1.55
CBWD3-207ENST00000611426 MEIS1O00470 390 aa24.74■■□□□ 1.55
CBWD3-207ENST00000611426 SREBF1P36956 1147 aa24.74■■□□□ 1.55
CBWD3-207ENST00000611426 ACTR2P61160 394 aa24.74■■□□□ 1.55
CBWD3-207ENST00000611426 MARCH8Q5T0T0 291 aa24.74■■□□□ 1.55
CBWD3-207ENST00000611426 DNAJB3Q8WWF6 145 aa24.74■■□□□ 1.55
CBWD3-207ENST00000611426 UHRF1Q96T88 793 aaPredicted RBP24.74■■□□□ 1.55
CBWD3-207ENST00000611426 YME1L1Q96TA2 773 aa24.74■■□□□ 1.55
CBWD3-207ENST00000611426 COL4A4P53420 1690 aaPredicted RBP24.74■■□□□ 1.55
CBWD3-207ENST00000611426 GHRP10912 638 aa24.73■■□□□ 1.55
CBWD3-207ENST00000611426 SCG2P13521 617 aa24.73■■□□□ 1.55
CBWD3-207ENST00000611426 INSRRP14616 1297 aa24.73■■□□□ 1.55
CBWD3-207ENST00000611426 ITGB3BPQ13352 177 aaPredicted RBP24.73■■□□□ 1.55
CBWD3-207ENST00000611426 JAKMIP3Q5VZ66 844 aa24.73■■□□□ 1.55
CBWD3-207ENST00000611426 SP7Q8TDD2 431 aaPredicted RBP24.73■■□□□ 1.55
CBWD3-207ENST00000611426 C17orf80Q9BSJ5 609 aa24.73■■□□□ 1.55
CBWD3-207ENST00000611426 TRPC6Q9Y210 931 aa24.73■■□□□ 1.55
CBWD3-207ENST00000611426 BMP1P13497 986 aa24.72■■□□□ 1.55
CBWD3-207ENST00000611426 STAT5BP51692 787 aa24.72■■□□□ 1.55
CBWD3-207ENST00000611426 MGAT3Q09327 533 aa24.72■■□□□ 1.55
CBWD3-207ENST00000611426 PLPPR4Q7Z2D5 763 aa24.72■■□□□ 1.55
CBWD3-207ENST00000611426 FBXO22Q8NEZ5 403 aa24.72■■□□□ 1.55
CBWD3-207ENST00000611426 HLA-CQ95604 372 aa24.72■■□□□ 1.55
CBWD3-207ENST00000611426 UPF3BQ9BZI7 483 aaKnown RBP24.72■■□□□ 1.55
CBWD3-207ENST00000611426 SIP14410 1827 aa24.72■■□□□ 1.55
CBWD3-207ENST00000611426 RPS6KB1P23443 525 aa24.71■■□□□ 1.55
CBWD3-207ENST00000611426 DDIT3P35638 169 aa24.71■■□□□ 1.55
CBWD3-207ENST00000611426 LPIN1Q14693 890 aa24.71■■□□□ 1.55
CBWD3-207ENST00000611426 RUFY3Q7L099 469 aa24.71■■□□□ 1.55
CBWD3-207ENST00000611426 FAM49AQ9H0Q0 323 aaPredicted RBP24.71■■□□□ 1.55
CBWD3-207ENST00000611426 CYP46A1Q9Y6A2 500 aa24.71■■□□□ 1.55
CBWD3-207ENST00000611426 TCF20Q9UGU0 1960 aaKnown RBP24.71■■□□□ 1.55
CBWD3-207ENST00000611426 NCOR1O75376 2440 aa24.71■■□□□ 1.55
CBWD3-207ENST00000611426 RPLP2P05387 115 aaKnown RBP24.7■■□□□ 1.55
CBWD3-207ENST00000611426 KCNQ1P51787 676 aa24.7■■□□□ 1.55
CBWD3-207ENST00000611426 PLCB4Q15147 1175 aa24.7■■□□□ 1.55
CBWD3-207ENST00000611426 NIPA1Q7RTP0 329 aa24.7■■□□□ 1.55
CBWD3-207ENST00000611426 CCDC12Q8WUD4 166 aaPredicted RBP24.7■■□□□ 1.55
CBWD3-207ENST00000611426 ZBTB10Q96DT7 871 aa24.7■■□□□ 1.55
CBWD3-207ENST00000611426 C6orf50Q9HD87 102 aa24.7■■□□□ 1.55
CBWD3-207ENST00000611426 CDY2AQ9Y6F7 541 aa24.7■■□□□ 1.55
CBWD3-207ENST00000611426 BDP1A6H8Y1 2624 aa24.7■■□□□ 1.54
CBWD3-207ENST00000611426 PRPF3O43395 683 aaKnown RBP24.69■■□□□ 1.54
CBWD3-207ENST00000611426 ATG7O95352 703 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms