RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 SIGLEC16A6NMB1 481 aa18.64■□□□□ 0.57
CDK11B-205ENST00000611150 MAGEB3O15480 346 aa18.64■□□□□ 0.57
CDK11B-205ENST00000611150 OXSR1O95747 527 aaPredicted RBP18.64■□□□□ 0.57
CDK11B-205ENST00000611150 PRLRP16471 622 aa18.64■□□□□ 0.57
CDK11B-205ENST00000611150 PAFAH1B1P43034 410 aa18.64■□□□□ 0.57
CDK11B-205ENST00000611150 CDK7P50613 346 aa18.64■□□□□ 0.57
CDK11B-205ENST00000611150 MAGOHP61326 146 aaKnown RBP18.64■□□□□ 0.57
CDK11B-205ENST00000611150 KRT83P78385 493 aa18.64■□□□□ 0.57
CDK11B-205ENST00000611150 KRT27Q7Z3Y8 459 aa18.64■□□□□ 0.57
CDK11B-205ENST00000611150 ZNF804AQ7Z570 1209 aa18.64■□□□□ 0.57
CDK11B-205ENST00000611150 FAM133AQ8N9E0 248 aa18.64■□□□□ 0.57
CDK11B-205ENST00000611150 MAGOHBQ96A72 148 aaKnown RBP18.64■□□□□ 0.57
CDK11B-205ENST00000611150 REXO2Q9Y3B8 237 aaKnown RBP18.64■□□□□ 0.57
CDK11B-205ENST00000611150 EAPPQ56P03 285 aaPredicted RBP18.63■□□□□ 0.57
CDK11B-205ENST00000611150 CABP7Q86V35 215 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 NELFBQ8WX92 580 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 CCDC42Q96M95 316 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 NLRP3Q96P20 1036 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 PARVBQ9HBI1 364 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 EPB41L5Q9HCM4 733 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 PTTG2Q9NZH5 202 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 PABPC4LP0CB38 370 aaKnown RBP18.63■□□□□ 0.57
CDK11B-205ENST00000611150 RTP1P59025 263 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 ZNF844Q08AG5 666 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 TRIM14Q14142 442 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 DIXDC1Q155Q3 683 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 NEK10Q6ZWH5 1172 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 MARK2Q7KZI7 788 aaKnown RBP18.63■□□□□ 0.57
CDK11B-205ENST00000611150 MIGA2Q7L4E1 593 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 TREML1Q86YW5 311 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 TRPC4APQ8TEL6 797 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 USP6NLQ92738 828 aa18.63■□□□□ 0.57
CDK11B-205ENST00000611150 CCNB1P14635 433 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 CDC27P30260 824 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 CTNNA1P35221 906 aaKnown RBP18.62■□□□□ 0.57
CDK11B-205ENST00000611150 ZBTB17Q13105 803 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 ZC2HC1CQ53FD0 456 aaPredicted RBP18.62■□□□□ 0.57
CDK11B-205ENST00000611150 C6orf183Q5T699 404 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 DEPDC1Q5TB30 811 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 LRRC8BQ6P9F7 803 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 TRIM67Q6ZTA4 783 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 FAM186BQ8IYM0 893 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 FNDC8Q8TC99 324 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 NUP88Q99567 741 aaPredicted RBP18.62■□□□□ 0.57
CDK11B-205ENST00000611150 GBA3Q9H227 469 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 DCLRE1BQ9H816 532 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 TRPC7Q9HCX4 862 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 SCHIP1Q9P0W5 487 aaPredicted RBP18.62■□□□□ 0.57
CDK11B-205ENST00000611150 MTUS1Q9ULD2 1270 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 CLIC4Q9Y696 253 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 TRIM64CA6NLI5 447 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 LYNP07948 512 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 RGS2P41220 211 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 FMR1Q06787 632 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDK11B-205ENST00000611150 LRRC34Q8IZ02 419 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 RIBC1Q8N443 379 aaPredicted RBP18.62■□□□□ 0.57
CDK11B-205ENST00000611150 PCDH11XQ9BZA7 1347 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 TANGO6Q9C0B7 1094 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 GINM1Q9NU53 330 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 TDRKHQ9Y2W6 561 aaKnown RBP18.62■□□□□ 0.57
CDK11B-205ENST00000611150 PCDHA5Q9Y5H7 936 aa18.62■□□□□ 0.57
CDK11B-205ENST00000611150 ROBO2Q9HCK4 1378 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 CBFA2T3O75081 653 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 KIF23Q02241 960 aaPredicted RBP18.61■□□□□ 0.57
CDK11B-205ENST00000611150 WASHC2DQ5SRD0 308 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 LRRC8CQ8TDW0 803 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 MAP4K1Q92918 833 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 LRRC45Q96CN5 670 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 CLK4Q9HAZ1 481 aaKnown RBP18.61■□□□□ 0.57
CDK11B-205ENST00000611150 NDUFA13Q9P0J0 144 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 ADD3Q9UEY8 706 aaKnown RBP18.61■□□□□ 0.57
CDK11B-205ENST00000611150 CCPG1Q9ULG6 757 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 USP15Q9Y4E8 981 aaPredicted RBP18.61■□□□□ 0.57
CDK11B-205ENST00000611150 MYH7P12883 1935 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 NALCNQ8IZF0 1738 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 A0A0G2JS52 829 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 TTC34A8MYJ7 566 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 H0YGN5 161 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 CYTH3O43739 400 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 SUN1O94901 812 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 HEXIM1O94992 359 aaKnown RBP18.61■□□□□ 0.57
CDK11B-205ENST00000611150 GLI1P08151 1106 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 CPA3P15088 417 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 ARFIP2P53365 341 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 SF3A3Q12874 501 aaKnown RBP eCLIP18.61■□□□□ 0.57
CDK11B-205ENST00000611150 EIF4A2Q14240 407 aaKnown RBP18.61■□□□□ 0.57
CDK11B-205ENST00000611150 CCDC6Q16204 474 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 MAMSTRQ6ZN01 415 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 SKA1Q96BD8 255 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 ZMAT5Q9UDW3 170 aaKnown RBP18.61■□□□□ 0.57
CDK11B-205ENST00000611150 MTMR7Q9Y216 660 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 GPC6Q9Y625 555 aaPredicted RBP18.61■□□□□ 0.57
CDK11B-205ENST00000611150 NFS1Q9Y697 457 aa18.61■□□□□ 0.57
CDK11B-205ENST00000611150 PHLPP1O60346 1717 aa18.6■□□□□ 0.57
CDK11B-205ENST00000611150 TCP1P17987 556 aaKnown RBP18.6■□□□□ 0.57
CDK11B-205ENST00000611150 HSD17B3P37058 310 aa18.6■□□□□ 0.57
CDK11B-205ENST00000611150 TUFMP49411 452 aaKnown RBP18.6■□□□□ 0.57
CDK11B-205ENST00000611150 PPARAQ07869 468 aa18.6■□□□□ 0.57
CDK11B-205ENST00000611150 ST13P4Q8IZP2 240 aaPredicted RBP18.6■□□□□ 0.57
CDK11B-205ENST00000611150 PPP1R14CQ8TAE6 165 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms