RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GDF3Q9NR23 364 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 TNNC1P63316 161 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 GPSM2P81274 684 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 KRT71Q3SY84 523 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 METTL13Q8N6R0 699 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 MYCBPAPQ8TBZ2 947 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 JMJD4Q9H9V9 463 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 LUC7LQ9NQ29 371 aaKnown RBP22.34■■□□□ 1.17
SSBP3-216ENST00000610401 GGT7Q9UJ14 662 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 GOLGA6L7A0A1B0GV03 622 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 MED24O75448 989 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 CDC37Q16543 378 aaPredicted RBP22.34■■□□□ 1.17
SSBP3-216ENST00000610401 PTGISQ16647 500 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 CAVIN3Q969G5 261 aa22.34■■□□□ 1.17
SSBP3-216ENST00000610401 INPP4AQ96PE3 977 aaPredicted RBP22.34■■□□□ 1.17
SSBP3-216ENST00000610401 PRLRP16471 622 aa22.33■■□□□ 1.17
SSBP3-216ENST00000610401 GUCY2CP25092 1073 aa22.33■■□□□ 1.17
SSBP3-216ENST00000610401 MDH1P40925 334 aaKnown RBP22.33■■□□□ 1.17
SSBP3-216ENST00000610401 DHX9Q08211 1270 aaKnown RBP22.33■■□□□ 1.17
SSBP3-216ENST00000610401 ZNF804AQ7Z570 1209 aa22.33■■□□□ 1.17
SSBP3-216ENST00000610401 CCDC65Q8IXS2 484 aa22.33■■□□□ 1.17
SSBP3-216ENST00000610401 PIGOQ8TEQ8 1089 aa22.33■■□□□ 1.17
SSBP3-216ENST00000610401 SCLT1Q96NL6 688 aa22.33■■□□□ 1.17
SSBP3-216ENST00000610401 EPN3Q9H201 632 aa22.33■■□□□ 1.17
SSBP3-216ENST00000610401 ZNF287Q9HBT7 754 aa22.33■■□□□ 1.17
SSBP3-216ENST00000610401 NOC2LQ9Y3T9 749 aaKnown RBP22.33■■□□□ 1.17
SSBP3-216ENST00000610401 ZBTB39O15060 712 aa22.33■■□□□ 1.16
SSBP3-216ENST00000610401 CETN3O15182 167 aa22.33■■□□□ 1.16
SSBP3-216ENST00000610401 MEFVO15553 781 aaPredicted RBP22.33■■□□□ 1.16
SSBP3-216ENST00000610401 MAGOHP61326 146 aaKnown RBP22.33■■□□□ 1.16
SSBP3-216ENST00000610401 UBXN2AP68543 259 aa22.33■■□□□ 1.16
SSBP3-216ENST00000610401 SFR1Q86XK3 245 aa22.33■■□□□ 1.16
SSBP3-216ENST00000610401 ARHGEF1Q92888 912 aaKnown RBP22.33■■□□□ 1.16
SSBP3-216ENST00000610401 MAGOHBQ96A72 148 aaKnown RBP22.33■■□□□ 1.16
SSBP3-216ENST00000610401 TM4SF1P30408 202 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 SLCO1A2P46721 670 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 ARHGAP44Q17R89 818 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 CCDC114Q96M63 670 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 CD209Q9NNX6 404 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 HOXA13P31271 388 aaPredicted RBP22.32■■□□□ 1.16
SSBP3-216ENST00000610401 RBM46Q8TBY0 533 aaKnown RBP22.32■■□□□ 1.16
SSBP3-216ENST00000610401 GLG1Q92896 1179 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 TAF1DQ9H5J8 278 aaPredicted RBP22.32■■□□□ 1.16
SSBP3-216ENST00000610401 LRP5O75197 1615 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 SSU72P8A0A1W2PR75 194 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 PJA2O43164 708 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 LRRN2O75325 713 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 GCNT3O95395 438 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 LDHCP07864 332 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 UCHL3P15374 230 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 GSTO1P78417 241 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 E2F5Q15329 346 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 UAP1Q16222 522 aaPredicted RBP22.32■■□□□ 1.16
SSBP3-216ENST00000610401 EXOC3L4Q17RC7 722 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 C16orf86Q6ZW13 317 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 CYP2W1Q8TAV3 490 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 ELMO3Q96BJ8 720 aa22.32■■□□□ 1.16
SSBP3-216ENST00000610401 CNOT8Q9UFF9 292 aaKnown RBP22.32■■□□□ 1.16
SSBP3-216ENST00000610401 ARMCX3Q9UH62 379 aaPredicted RBP22.32■■□□□ 1.16
SSBP3-216ENST00000610401 KIF4AO95239 1232 aa22.31■■□□□ 1.16
SSBP3-216ENST00000610401 LCA5LO95447 670 aa22.31■■□□□ 1.16
SSBP3-216ENST00000610401 MCTP2Q6DN12 878 aa22.31■■□□□ 1.16
SSBP3-216ENST00000610401 B4GALNT4Q76KP1 1039 aa22.31■■□□□ 1.16
SSBP3-216ENST00000610401 GLYCTKQ8IVS8 523 aa22.31■■□□□ 1.16
SSBP3-216ENST00000610401 LZTS2Q9BRK4 669 aa22.31■■□□□ 1.16
SSBP3-216ENST00000610401 RNF10Q8N5U6 811 aaKnown RBP22.31■■□□□ 1.16
SSBP3-216ENST00000610401 SELENOSQ9BQE4 189 aa22.31■■□□□ 1.16
SSBP3-216ENST00000610401 RIC8AQ9NPQ8 531 aa22.31■■□□□ 1.16
SSBP3-216ENST00000610401 MTMR4Q9NYA4 1195 aa22.31■■□□□ 1.16
SSBP3-216ENST00000610401 FGGP02679 453 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 FXR2P51116 673 aaKnown RBP eCLIP22.3■■□□□ 1.168e-6■■■■□ 21.8
SSBP3-216ENST00000610401 TRIM59Q8IWR1 403 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 RGL1Q9NZL6 768 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 TMOD4Q9NZQ9 345 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 FRMD3A2A2Y4 597 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 BUB1BO60566 1050 aaPredicted RBP22.3■■□□□ 1.16
SSBP3-216ENST00000610401 PPP1R2P41236 205 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 RPGRQ92834 1020 aaKnown RBP22.3■■□□□ 1.16
SSBP3-216ENST00000610401 NYXQ9GZU5 481 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 ANKRD36CQ5JPF3 1778 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 AKAP3O75969 853 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 CYP11B2P19099 503 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 KIRREL3Q8IZU9 778 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 CUL5Q93034 780 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 CABS1Q96KC9 395 aa22.3■■□□□ 1.16
SSBP3-216ENST00000610401 DDX4Q9NQI0 724 aaKnown RBP22.3■■□□□ 1.16
SSBP3-216ENST00000610401 A0A1B0GUL6 1792 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 KRT13P13646 458 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 USP8P40818 1118 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 IFNAR2P48551 515 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 ITGB3BPQ13352 177 aaPredicted RBP22.29■■□□□ 1.16
SSBP3-216ENST00000610401 DOK7Q18PE1 504 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 ZC2HC1CQ53FD0 456 aaPredicted RBP22.29■■□□□ 1.16
SSBP3-216ENST00000610401 UBAP2Q5T6F2 1119 aaKnown RBP22.29■■□□□ 1.16
SSBP3-216ENST00000610401 GCNT4Q9P109 453 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 NAGPAQ9UK23 515 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 PCDHA1Q9Y5I3 950 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 XRCC5P13010 732 aaKnown RBP22.29■■□□□ 1.16
SSBP3-216ENST00000610401 POLD1P28340 1107 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms