RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 GMNNO75496 209 aa15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 IFNAR2P48551 515 aa15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 CCNA1P78396 465 aa15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 NFIXQ14938 502 aa15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 POTEBQ6S5H4 581 aa15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 MAP7D3Q8IWC1 876 aa15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 FAM81BQ96LP2 452 aa15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 SEPT10Q9P0V9 454 aa15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 NXF1Q9UBU9 619 aaKnown RBP15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 STK38LQ9Y2H1 464 aa15.45■□□□□ 0.06
PCDHB16-201ENST00000609684 SGK1O00141 431 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 TLR3O15455 904 aaKnown RBP15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 ECE2O60344 883 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 TPD52P55327 224 aaPredicted RBP15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 ATP2C1P98194 919 aaPredicted RBP15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 LMNB2Q03252 620 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 PHLDB2Q86SQ0 1253 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 POLD4Q9HCU8 107 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 ABCB6Q9NP58 842 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 POC1B-GALNT4F8VUJ3 575 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 ECEL1O95672 775 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 DHX9Q08211 1270 aaKnown RBP15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 IFRD2Q12894 506 aaPredicted RBP15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 COASYQ13057 564 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 ALCAMQ13740 583 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 PPP1R18Q6NYC8 613 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 SRBD1Q8N5C6 995 aaKnown RBP15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 NEDD1Q8NHV4 660 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 TAF6LQ9Y6J9 622 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 CNGA1P29973 690 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 RNF207Q6ZRF8 634 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 ZBTB33Q86T24 672 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 RFX6Q8HWS3 928 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 NME8Q8N427 588 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 USP27XA6NNY8 438 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 CSF1RP07333 972 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 YWHAGP61981 247 aaKnown RBP eCLIP15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 RCSD1Q6JBY9 416 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 PROM2Q8N271 834 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 AP1M1Q9BXS5 423 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 MAD1L1Q9Y6D9 718 aa15.44■□□□□ 0.06
PCDHB16-201ENST00000609684 TDP2O95551 362 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 LIG3P49916 1009 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 CASP8Q14790 479 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 METTL16Q86W50 562 aaKnown RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 INTS9Q9NV88 658 aaKnown RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 A0A1B0GUA9 196 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 PALM3A6NDB9 673 aaPredicted RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 LRRC53A6NM62 1247 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 OSTNP61366 133 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 C12orf60Q5U649 245 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 RINT1Q6NUQ1 792 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 ZNF34Q8IZ26 560 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 IGDCC4Q8TDY8 1250 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 FBXO2Q9UK22 296 aaPredicted RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 A6NJR5 290 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 CD58P19256 250 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 RASSF2P50749 326 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 DALRD3Q5D0E6 543 aaKnown RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 DNAJC24Q6P3W2 148 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 PDZD4Q76G19 769 aaPredicted RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 CEP72Q9P209 647 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 AFF2P51816 1311 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 NR3C1P04150 777 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 HSPA6P17066 643 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 MRPS25P82663 173 aaKnown RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 SPATS2Q86XZ4 545 aaKnown RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 ADGRF4Q8IZF3 695 aa15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 MRPL47Q9HD33 250 aaKnown RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
PCDHB16-201ENST00000609684 F5H6K3 240 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 AKR1B1P15121 316 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 KLRC3Q07444 240 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 CYP4F22Q6NT55 531 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 LMNTD2Q8IXW0 634 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 FAM20AQ96MK3 541 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 PPP1R12CQ9BZL4 782 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 FAM205CA6NFA0 338 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 KRT1P04264 644 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 RFX5P48382 616 aaPredicted RBP15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 PRELPP51888 382 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 PDIA6Q15084 440 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 BANK1Q8NDB2 785 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 DNAJC12Q9UKB3 198 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 POTEFA5A3E0 1075 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 POTEIP0CG38 1075 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 ABCD1P33897 745 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 ORC2Q13416 577 aaPredicted RBP15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 MTMR1Q13613 665 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 POTEGQ6S5H5 508 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 POTEEQ6S8J3 1075 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 FAM149B1Q96BN6 582 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 PFDN4Q9NQP4 134 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 ADAMTS13Q76LX8 1427 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 K7ERI5 159 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 SRGAP2O75044 1071 aa15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 PNMA6AP0CW24 399 aaPredicted RBP15.42■□□□□ 0.06
PCDHB16-201ENST00000609684 TSNAXIP1Q2TAA8 658 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms