RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 LRP12Q9Y561 859 aa2.83□□□□□ -1.96
ITGB5-213ENST00000608945 NPHP3-ACAD11A0A0J9YXS1 232 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 IQCA1LA6NCM1 817 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 C2orf71A6NGG8 1288 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 AURKAO14965 403 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 VAMP4O75379 141 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 GJB6O95452 261 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 PEX11BO96011 259 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 IFNGR1P15260 489 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 PAMP19021 973 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 L1CAMP32004 1257 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 SLC25A3Q00325 362 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 SOGA3Q5TF21 947 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 NBPF6Q5VWK0 638 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 RCSD1Q6JBY9 416 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 CD300LDQ6UXZ3 194 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 USP43Q70EL4 1123 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 CABP7Q86V35 215 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 NLGN2Q8NFZ4 835 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 NBPF4Q96M43 638 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 ZNF778Q96MU6 729 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 ST7Q9NRC1 585 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 APEX2Q9UBZ4 518 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 EMC9Q9Y3B6 208 aa2.82□□□□□ -1.96
ITGB5-213ENST00000608945 B2RBV5 119 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 MYO1BO43795 1136 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 ZBTB7AO95365 584 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 CPP00450 1065 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 SNRPB2P08579 225 aaKnown RBP2.81□□□□□ -1.96
ITGB5-213ENST00000608945 KCNJ6P48051 423 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 RAB33AQ14088 237 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 ETV3LQ6ZN32 361 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 HDGFL2Q7Z4V5 671 aaPredicted RBP2.81□□□□□ -1.96
ITGB5-213ENST00000608945 TRIM59Q8IWR1 403 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 LRRC47Q8N1G4 583 aaKnown RBP2.81□□□□□ -1.96
ITGB5-213ENST00000608945 ST13P5Q8NFI4 369 aaPredicted RBP2.81□□□□□ -1.96
ITGB5-213ENST00000608945 CCDC140Q96MF4 163 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 ZSWIM3Q96MP5 696 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 CYP26B1Q9NR63 512 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 ZNF580Q9UK33 172 aa2.81□□□□□ -1.96
ITGB5-213ENST00000608945 GRID2IPA4D2P6 1211 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 CCDC85CA6NKD9 419 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 NPHS1O60500 1241 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 APPP05067 770 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 ITGAVP06756 1048 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 HOXC12P31275 282 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 IFRD2Q12894 506 aaPredicted RBP2.8□□□□□ -1.96
ITGB5-213ENST00000608945 HSP90AA2PQ14568 343 aaPredicted RBP2.8□□□□□ -1.96
ITGB5-213ENST00000608945 SLC10A6Q3KNW5 377 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 MTERF2Q49AM1 385 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 GTF2IRD2BQ6EKJ0 949 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 IQCEQ6IPM2 695 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 GTF2IRD2Q86UP8 949 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 ZNF227Q86WZ6 799 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 MIB1Q86YT6 1006 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 SRRM1Q8IYB3 904 aaKnown RBP2.8□□□□□ -1.96
ITGB5-213ENST00000608945 CELF2-AS1Q8N7Q2 184 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 NETO2Q8NC67 525 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 MICAL1Q8TDZ2 1067 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 BTN2A2Q8WVV5 523 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 SREK1Q8WXA9 508 aaKnown RBP2.8□□□□□ -1.96
ITGB5-213ENST00000608945 NEIL1Q96FI4 390 aaPredicted RBP2.8□□□□□ -1.96
ITGB5-213ENST00000608945 IPO9Q96P70 1041 aaKnown RBP2.8□□□□□ -1.96
ITGB5-213ENST00000608945 NKX2-4Q9H2Z4 354 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 BARX1Q9HBU1 254 aaPredicted RBP2.8□□□□□ -1.96
ITGB5-213ENST00000608945 SIRPGQ9P1W8 387 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 NUDT5Q9UKK9 219 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 SIT1Q9Y3P8 196 aa2.8□□□□□ -1.96
ITGB5-213ENST00000608945 SPATA31A6Q5VVP1 1343 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 PRR23D1E9PI22 279 aaPredicted RBP2.79□□□□□ -1.96
ITGB5-213ENST00000608945 ZNF185O15231 689 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 MEFVO15553 781 aaPredicted RBP2.79□□□□□ -1.96
ITGB5-213ENST00000608945 KLF4O43474 513 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 PRR23D2P0DMB1 279 aaPredicted RBP2.79□□□□□ -1.96
ITGB5-213ENST00000608945 PLS3P13797 630 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 ECI1P42126 302 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 ZNF81P51508 661 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 GTF2A2P52657 109 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 KCNAB2Q13303 367 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 PCOLCEQ15113 449 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 E4F1Q66K89 784 aaPredicted RBP2.79□□□□□ -1.96
ITGB5-213ENST00000608945 MRM1Q6IN84 353 aaKnown RBP2.79□□□□□ -1.96
ITGB5-213ENST00000608945 DPH6Q7L8W6 267 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 RALYLQ86SE5 291 aaKnown RBP2.79□□□□□ -1.96
ITGB5-213ENST00000608945 MRGPREQ86SM8 312 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 CPNE8Q86YQ8 564 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 TMPRSS6Q8IU80 811 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 LZTR1Q8N653 840 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 KCTD13Q8WZ19 329 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 COPS5Q92905 334 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 ZNF669Q96BR6 464 aaPredicted RBP2.79□□□□□ -1.96
ITGB5-213ENST00000608945 SGSM3Q96HU1 749 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 MRGPRX3Q96LB0 322 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 MMP19Q99542 508 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 AARSD1Q9BTE6 412 aaKnown RBP2.79□□□□□ -1.96
ITGB5-213ENST00000608945 AURKAIP1Q9NWT8 199 aaPredicted RBP2.79□□□□□ -1.96
ITGB5-213ENST00000608945 CLEC1BQ9P126 229 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 NOTCH4Q99466 2003 aa2.79□□□□□ -1.96
ITGB5-213ENST00000608945 H0Y858 1186 aa2.78□□□□□ -1.96
ITGB5-213ENST00000608945 PDPK1O15530 556 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms