RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 TINF2Q9BSI4 451 aa6.19□□□□□ -1.42
CTSS-206ENST00000607427 JAM3Q9BX67 310 aa6.19□□□□□ -1.42
CTSS-206ENST00000607427 R3HCC1Q9Y3T6 440 aaKnown RBP6.19□□□□□ -1.42
CTSS-206ENST00000607427 MSCO60682 206 aa6.18□□□□□ -1.42
CTSS-206ENST00000607427 ACRV1P26436 265 aa6.18□□□□□ -1.42
CTSS-206ENST00000607427 RAC3P60763 192 aa6.18□□□□□ -1.42
CTSS-206ENST00000607427 HSP90AA2PQ14568 343 aaPredicted RBP6.18□□□□□ -1.42
CTSS-206ENST00000607427 USP10Q14694 798 aaKnown RBP6.18□□□□□ -1.42
CTSS-206ENST00000607427 ZNF568Q3ZCX4 644 aa6.18□□□□□ -1.42
CTSS-206ENST00000607427 FAM89AQ96GI7 184 aa6.18□□□□□ -1.42
CTSS-206ENST00000607427 PHF20Q9BVI0 1012 aa6.18□□□□□ -1.42
CTSS-206ENST00000607427 PDGFDQ9GZP0 370 aaPredicted RBP6.18□□□□□ -1.42
CTSS-206ENST00000607427 PTPN22Q9Y2R2 807 aa6.18□□□□□ -1.42
CTSS-206ENST00000607427 FBXO21O94952 628 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 TUBA3CQ13748 450 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 DDR2Q16832 855 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 LRCH2Q5VUJ6 765 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 TUBA3EQ6PEY2 450 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 MAMDC4Q6UXC1 1216 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 USP53Q70EK8 1073 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 OTOP3Q7RTS5 596 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 CELF2-AS1Q8N7Q2 184 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 ZNF483Q8TF39 744 aaPredicted RBP6.17□□□□□ -1.42
CTSS-206ENST00000607427 DCAF4Q8WV16 495 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 CLEC4DQ8WXI8 215 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 MMRN2Q9H8L6 949 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 ZFP69BQ9UJL9 534 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 OAZ3Q9UMX2 235 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 NUB1Q9Y5A7 615 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 DMRT1Q9Y5R6 373 aa6.17□□□□□ -1.42
CTSS-206ENST00000607427 IQCA1LA6NCM1 817 aa6.16□□□□□ -1.42
CTSS-206ENST00000607427 SLC27A2O14975 620 aa6.16□□□□□ -1.42
CTSS-206ENST00000607427 ZNF888P0CJ79 500 aaPredicted RBP6.16□□□□□ -1.42
CTSS-206ENST00000607427 LMO1P25800 156 aa6.16□□□□□ -1.42
CTSS-206ENST00000607427 LBX2Q6XYB7 198 aa6.16□□□□□ -1.42
CTSS-206ENST00000607427 SCUBE1Q8IWY4 988 aa6.16□□□□□ -1.42
CTSS-206ENST00000607427 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
CTSS-206ENST00000607427 NAF1Q96HR8 494 aaKnown RBP6.16□□□□□ -1.42
CTSS-206ENST00000607427 ZFYVE21Q9BQ24 234 aa6.16□□□□□ -1.42
CTSS-206ENST00000607427 ST7Q9NRC1 585 aa6.16□□□□□ -1.42
CTSS-206ENST00000607427 KCND1Q9NSA2 647 aa6.16□□□□□ -1.42
CTSS-206ENST00000607427 PPARGC1AQ9UBK2 798 aaKnown RBP6.16□□□□□ -1.42
CTSS-206ENST00000607427 FGFR1P11362 822 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 CR2P20023 1033 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 MAKP20794 623 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 GRK2P25098 689 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 GRK3P35626 688 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 SPIRE1Q08AE8 756 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 TUSC3Q13454 348 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 KIZQ2M2Z5 673 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 ANKS3Q6ZW76 656 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 UHMK1Q8TAS1 419 aaKnown RBP6.15□□□□□ -1.42
CTSS-206ENST00000607427 GMLQ99445 158 aa6.15□□□□□ -1.42
CTSS-206ENST00000607427 AARSD1Q9BTE6 412 aaKnown RBP6.15□□□□□ -1.42
CTSS-206ENST00000607427 KLF4O43474 513 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 CKMP06732 381 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 FAHP16930 419 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 GRIN1Q05586 938 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 DUSP8Q13202 625 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 PAN2Q504Q3 1202 aaKnown RBP6.14□□□□□ -1.43
CTSS-206ENST00000607427 HABP4Q5JVS0 413 aaKnown RBP6.14□□□□□ -1.43
CTSS-206ENST00000607427 ZNF627Q7L945 461 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 STPG3Q8N7X2 389 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 SLC43A3Q8NBI5 491 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 OSBP2Q969R2 916 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 ARHGEF4Q9NR80 690 aa6.14□□□□□ -1.43
CTSS-206ENST00000607427 H0Y858 1186 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 PRODHO43272 600 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 GNAT1P11488 350 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 PABPC1P11940 636 aaKnown RBP6.13□□□□□ -1.43
CTSS-206ENST00000607427 DNAJA1P31689 397 aaKnown RBP6.13□□□□□ -1.43
CTSS-206ENST00000607427 GLRBP48167 497 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 ATXN1P54253 815 aaKnown RBP6.13□□□□□ -1.43
CTSS-206ENST00000607427 GPR85P60893 370 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 NTRK3Q16288 839 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 RNF151Q2KHN1 245 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 STYK1Q6J9G0 422 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 KCNT2Q6UVM3 1135 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 RBM12BQ8IXT5 1001 aaKnown RBP6.13□□□□□ -1.43
CTSS-206ENST00000607427 ST13P5Q8NFI4 369 aaPredicted RBP6.13□□□□□ -1.43
CTSS-206ENST00000607427 OR14A2Q96R54 314 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 DPYSL5Q9BPU6 564 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 CARD11Q9BXL7 1154 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 ARHGAP20Q9P2F6 1191 aa6.13□□□□□ -1.43
CTSS-206ENST00000607427 ENO2P09104 434 aaPredicted RBP6.12□□□□□ -1.43
CTSS-206ENST00000607427 COL6A2P12110 1019 aa6.12□□□□□ -1.43
CTSS-206ENST00000607427 EPHA5P54756 1037 aa6.12□□□□□ -1.43
CTSS-206ENST00000607427 NSMFQ6X4W1 530 aa6.12□□□□□ -1.43
CTSS-206ENST00000607427 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.12□□□□□ -1.43
CTSS-206ENST00000607427 IFNL3Q8IZI9 196 aa6.12□□□□□ -1.43
CTSS-206ENST00000607427 ZNF808Q8N4W9 903 aaPredicted RBP6.12□□□□□ -1.43
CTSS-206ENST00000607427 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.12□□□□□ -1.43
CTSS-206ENST00000607427 KCNJ15Q99712 375 aa6.12□□□□□ -1.43
CTSS-206ENST00000607427 PRRX2Q99811 253 aa6.12□□□□□ -1.43
CTSS-206ENST00000607427 ZNF703Q9H7S9 590 aaPredicted RBP6.12□□□□□ -1.43
CTSS-206ENST00000607427 DSEQ9UL01 958 aa6.12□□□□□ -1.43
CTSS-206ENST00000607427 TELO2Q9Y4R8 837 aa6.12□□□□□ -1.43
CTSS-206ENST00000607427 NKRFO15226 690 aaKnown RBP eCLIP6.11□□□□□ -1.43
CTSS-206ENST00000607427 CDC14BO60729 498 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms