RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 PRPF38AQ8NAV1 312 aaKnown RBP5.51□□□□□ -1.53
RNU6-88P-201ENST00000606801 ELF4Q99607 663 aaPredicted RBP5.51□□□□□ -1.53
RNU6-88P-201ENST00000606801 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU6-88P-201ENST00000606801 EMC7Q9NPA0 242 aa5.51□□□□□ -1.53
RNU6-88P-201ENST00000606801 RIC8BQ9NVN3 520 aa5.51□□□□□ -1.53
RNU6-88P-201ENST00000606801 ZKSCAN5Q9Y2L8 839 aa5.51□□□□□ -1.53
RNU6-88P-201ENST00000606801 NOP58Q9Y2X3 529 aaKnown RBP5.51□□□□□ -1.53
RNU6-88P-201ENST00000606801 GAS7O60861 476 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 NCAM1P13591 858 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 CDK11BP21127 795 aaKnown RBP5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 PTX3P26022 381 aaPredicted RBP5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 CFPP27918 469 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 SDHAP31040 664 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 LSSP48449 732 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 CACNB2Q08289 660 aaPredicted RBP5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 STAT4Q14765 748 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 CT47A1Q5JQC4 288 aaPredicted RBP5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 CATSPEREQ5SY80 951 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 CC2D1AQ6P1N0 951 aaPredicted RBP5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 ETV3LQ6ZN32 361 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 KIAA1958Q8N8K9 716 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 MZB1Q8WU39 189 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 STAG1Q8WVM7 1258 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 TOE1Q96GM8 510 aaKnown RBP5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 IFT22Q9H7X7 185 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 KCNH7Q9NS40 1196 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 SIRT5Q9NXA8 310 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 BTBD7Q9P203 1132 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 SPO11Q9Y5K1 396 aa5.5□□□□□ -1.53
RNU6-88P-201ENST00000606801 TCAF2A6NFQ2 919 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 ZEB2O60315 1214 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 SEMA7AO75326 666 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 NCLP19338 710 aaKnown RBP5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 KIF11P52732 1056 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 DLG4P78352 724 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 TMEM132EQ6IEE7 984 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 ESRP1Q6NXG1 681 aaKnown RBP5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 TMEFF1Q8IYR6 380 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 ZCRB1Q8TBF4 217 aaKnown RBP5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 USP7Q93009 1102 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 FOXRED1Q96CU9 486 aaPredicted RBP5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 TOX2Q96NM4 488 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 NOX5Q96PH1 765 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 TTC1Q99614 292 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 TRIM8Q9BZR9 551 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 EPB41L4AQ9HCS5 686 aaPredicted RBP5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 VTA1Q9NP79 307 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 CD320Q9NPF0 282 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 NUB1Q9Y5A7 615 aa5.49□□□□□ -1.53
RNU6-88P-201ENST00000606801 H7C1D1 291 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 N4BP3O15049 544 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 GPR39O43194 453 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 MPIG6BO95866 241 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 MMEP08473 750 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 GJA4P35212 333 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 KPNA1P52294 538 aaPredicted RBP5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 IL2P60568 153 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 SMAD3P84022 425 aaKnown RBP5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 DBPQ10586 325 aaPredicted RBP5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 RTP5Q14D33 572 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 TMEM132BQ14DG7 1078 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 SMAD2Q15796 467 aaKnown RBP5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 CD276Q5ZPR3 534 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 OLFML2BQ68BL8 750 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 CD300LDQ6UXZ3 194 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 LIPIQ6XZB0 460 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 B3GNT8Q7Z7M8 397 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 EFHBQ8N7U6 833 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 WDR66Q8TBY9 1149 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 ASB15Q8WXK1 588 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 DDX11Q96FC9 970 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 C16orf92Q96LL3 132 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 RNF38Q9H0F5 515 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 ZMAT4Q9H898 229 aa5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 SMG5Q9UPR3 1016 aaKnown RBP5.48□□□□□ -1.53
RNU6-88P-201ENST00000606801 hCG_2014768A0A024R1R8 64 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 LCHNA4D1U4 455 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 PRAMEF25A6NGN4 478 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 NPIPB6E9PJ23 425 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 FOXP2O15409 715 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 BRINP1O60477 761 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 HERVK_113P62684 666 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 FOXO4P98177 505 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 KCNA10Q16322 511 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 RTN4RL1Q86UN2 441 aaPredicted RBP5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 STK32CQ86UX6 486 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 C1QL4Q86Z23 238 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 ATL2Q8NHH9 583 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 SMARCC2Q8TAQ2 1214 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 GORASP1Q9BQQ3 440 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 AMNQ9BXJ7 453 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 ACSS2Q9NR19 701 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 WASHC2CQ9Y4E1 1318 aa5.47□□□□□ -1.53
RNU6-88P-201ENST00000606801 GOLGA6L22H0YM25 854 aa5.46□□□□□ -1.54
RNU6-88P-201ENST00000606801 HIP1RO75146 1068 aa5.46□□□□□ -1.54
RNU6-88P-201ENST00000606801 PLA2G1BP04054 148 aaKnown RBP5.46□□□□□ -1.54
RNU6-88P-201ENST00000606801 AOAHP28039 575 aa5.46□□□□□ -1.54
RNU6-88P-201ENST00000606801 MC4RP32245 332 aa5.46□□□□□ -1.54
RNU6-88P-201ENST00000606801 LIMS1P48059 325 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms