RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 MRPL11Q9Y3B7 192 aaKnown RBP17.56■□□□□ 0.4
CTSA-214ENST00000606788 ZNF185O15231 689 aa17.55■□□□□ 0.4
CTSA-214ENST00000606788 ATP1A1P05023 1023 aaKnown RBP17.55■□□□□ 0.4
CTSA-214ENST00000606788 HOXD13P35453 343 aa17.55■□□□□ 0.4
CTSA-214ENST00000606788 NAP1L1P55209 391 aaKnown RBP17.55■□□□□ 0.4
CTSA-214ENST00000606788 RAPGEF1Q13905 1077 aa17.55■□□□□ 0.4
CTSA-214ENST00000606788 UTP14CQ5TAP6 766 aaKnown RBP17.55■□□□□ 0.4
CTSA-214ENST00000606788 MBOAT7Q96N66 472 aa17.55■□□□□ 0.4
CTSA-214ENST00000606788 NAP1L4Q99733 375 aaKnown RBP17.55■□□□□ 0.4
CTSA-214ENST00000606788 IPO5O00410 1097 aaKnown RBP17.55■□□□□ 0.4
CTSA-214ENST00000606788 FAM13AO94988 1023 aa17.55■□□□□ 0.4
CTSA-214ENST00000606788 FAM20AQ96MK3 541 aa17.55■□□□□ 0.4
CTSA-214ENST00000606788 NAPGQ99747 312 aaPredicted RBP17.55■□□□□ 0.4
CTSA-214ENST00000606788 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.55■□□□□ 0.4
CTSA-214ENST00000606788 BUB1O43683 1085 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 ZSCAN20P17040 1043 aaPredicted RBP17.54■□□□□ 0.4
CTSA-214ENST00000606788 ZCWPW2Q504Y3 356 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 HYIQ5T013 277 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 RINT1Q6NUQ1 792 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 GJB7Q6PEY0 223 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 SYT2Q8N9I0 419 aaPredicted RBP17.54■□□□□ 0.4
CTSA-214ENST00000606788 ERGIC2Q96RQ1 377 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 KCTD10Q9H3F6 313 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 CENPFP49454 3210 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 PHF20L1A8MW92 1017 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 TISP43B9A030 160 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 SLC9A1P19634 815 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 CXCR5P32302 372 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 CYP2J2P51589 502 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 CHMP4BP1P59074 171 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 TEPSINQ96N21 525 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 TAAR1Q96RJ0 339 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 SMARCAL1Q9NZC9 954 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 ZNF536O15090 1300 aa17.54■□□□□ 0.4
CTSA-214ENST00000606788 CYLC1P35663 651 aaPredicted RBP17.53■□□□□ 0.4
CTSA-214ENST00000606788 PSMD2Q13200 908 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 ANGEL2Q5VTE6 544 aaKnown RBP17.53■□□□□ 0.4
CTSA-214ENST00000606788 ATG4CQ96DT6 458 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 WRNIP1Q96S55 665 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 LXNQ9BS40 222 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 PLEKHA4Q9H4M7 779 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 RIPK3Q9Y572 518 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 TESPA1A2RU30 521 aaPredicted RBP17.53■□□□□ 0.4
CTSA-214ENST00000606788 HMGCS2P54868 508 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 FAM133AQ8N9E0 248 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 RPAP3Q9H6T3 665 aaPredicted RBP17.53■□□□□ 0.4
CTSA-214ENST00000606788 CETN3O15182 167 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 PSMD10O75832 226 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 MOCS3O95396 460 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 FGFR1OPO95684 399 aaKnown RBP17.53■□□□□ 0.4
CTSA-214ENST00000606788 KCNH2Q12809 1159 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 SPA17Q15506 151 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 JADE2Q9NQC1 790 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 KCNH7Q9NS40 1196 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 FEM1BQ9UK73 627 aa17.53■□□□□ 0.4
CTSA-214ENST00000606788 ZMYND10O75800 440 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 AKAP3O75969 853 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 VCAM1P19320 739 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 CIITAP33076 1130 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 MMP14P50281 582 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 KIF11P52732 1056 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 FAM83AQ86UY5 434 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 NOA1Q8NC60 698 aaKnown RBP17.52■□□□□ 0.4
CTSA-214ENST00000606788 NUP58Q9BVL2 599 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 PARD6BQ9BYG5 372 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 IFIH1Q9BYX4 1025 aaKnown RBP17.52■□□□□ 0.4
CTSA-214ENST00000606788 PGAP2Q9UHJ9 254 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 CDC23Q9UJX2 597 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 TELO2Q9Y4R8 837 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 ZNF541Q9H0D2 1346 aa17.52■□□□□ 0.4
CTSA-214ENST00000606788 PPP1R2P41236 205 aa17.52■□□□□ 0.39
CTSA-214ENST00000606788 RPS6P62753 249 aaKnown RBP17.52■□□□□ 0.39
CTSA-214ENST00000606788 TRPM4Q8TD43 1214 aa17.52■□□□□ 0.39
CTSA-214ENST00000606788 SH2D4AQ9H788 454 aa17.52■□□□□ 0.39
CTSA-214ENST00000606788 ZNF646O15015 1829 aaPredicted RBP17.52■□□□□ 0.39
CTSA-214ENST00000606788 EFCAB8A8MWE9 144 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 FECHP22830 423 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 MATR3P43243 847 aaKnown RBP eCLIP17.51■□□□□ 0.39
CTSA-214ENST00000606788 KNOP1Q1ED39 458 aaKnown RBP17.51■□□□□ 0.39
CTSA-214ENST00000606788 PRPF38AQ8NAV1 312 aaKnown RBP17.51■□□□□ 0.39
CTSA-214ENST00000606788 HSD17B14Q9BPX1 270 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 PCIF1Q9H4Z3 704 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 SUGCTQ9HAC7 445 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 EHD2Q9NZN4 543 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 ZHX2Q9Y6X8 837 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 NCK2O43639 380 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 ODR4Q5SWX8 454 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 MOXD1Q6UVY6 613 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 ELMO3Q96BJ8 720 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 GDAP1L1Q96MZ0 367 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 CAPN6Q9Y6Q1 641 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 PIK3CDO00329 1044 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 USO1O60763 962 aaKnown RBP17.51■□□□□ 0.39
CTSA-214ENST00000606788 TUBB4AP04350 444 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 TNIP1Q15025 636 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 GPRC5CQ9NQ84 441 aa17.51■□□□□ 0.39
CTSA-214ENST00000606788 TBX3O15119 743 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 ATP9AO75110 1047 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 NOL4O94818 638 aa17.5■□□□□ 0.39
CTSA-214ENST00000606788 EYA4O95677 639 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms