RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SBNO1A3KN83 1393 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 ETV2O00321 342 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 CHL1O00533 1208 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 GIPC1O14908 333 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 MEFVO15553 781 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 RASSF9O75901 435 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 IPO7O95373 1038 aaKnown RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 GNAI2P04899 355 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 EPB41P11171 864 aaKnown RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 RDXP35241 583 aaKnown RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 ETV3P41162 512 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 FAM160A1Q05DH4 1040 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 ST3GAL1Q11201 340 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 SLBPQ14493 270 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 INPP5AQ14642 412 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 NCAPHQ15003 741 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 ME3Q16798 604 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 WHAMMP3Q1A5X7 153 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 SLC5A9Q2M3M2 681 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 PRAMEF13Q5VWM6 474 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 TMEM132EQ6IEE7 984 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 NAA16Q6N069 864 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 CWC27Q6UX04 472 aaKnown RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 C11orf57Q6ZUT1 292 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 MICALCLQ6ZW33 695 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 C14orf37Q86TY3 774 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 N4BP2Q86UW6 1770 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 CILP2Q8IUL8 1156 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 TMEM139Q8IV31 216 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 APLFQ8IW19 511 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 ZSCAN29Q8IWY8 852 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 C8orf58Q8NAV2 365 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 PREX1Q8TCU6 1659 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 CEMIPQ8WUJ3 1361 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 BORCS6Q96GS4 357 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 RPGRIP1Q96KN7 1286 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 PAIP2Q9BPZ3 127 aaKnown RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 LLPHQ9BRT6 129 aaKnown RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 CDHR2Q9BYE9 1310 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 KRTAP4-2Q9BYR5 136 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 TRIM6Q9C030 488 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 XPO4Q9C0E2 1151 aaKnown RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 TMX4Q9H1E5 349 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 TRIT1Q9H3H1 467 aaKnown RBP4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 C19orf73Q9NVV2 129 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 RAPGEFL1Q9UHV5 662 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 PPP2R2CQ9Y2T4 447 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 ST14Q9Y5Y6 855 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 SNCAIPQ9Y6H5 919 aa4.59□□□□□ -1.67
HMGB1P50-201ENST00000605814 ADGRF5Q8IZF2 1346 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 DNAJC25-GNG10A0A024R161 153 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 PES1O00541 588 aaKnown RBP4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 FYB1O15117 783 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 TREHO43280 583 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 COQ9O75208 318 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ATP5JP18859 108 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 GLDCP23378 1020 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 LTKP29376 864 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 GRK4P32298 578 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 NF2P35240 595 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 LINC00310P59036 64 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 CHMP4BP1P59074 171 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 GNG11P61952 73 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 FANCCQ00597 558 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 IFFO1Q0D2I5 559 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 DCTN1Q14203 1278 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 PPP2R5AQ15172 486 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 NKG7Q16617 165 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 RALGPS1Q5JS13 557 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ADALQ6DHV7 355 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 TTLL10Q6ZVT0 673 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 UBE3BQ7Z3V4 1068 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 TMC6Q7Z403 805 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 KIAA1328Q86T90 577 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 CDH24Q86UP0 819 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ARHGEF25Q86VW2 580 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 VSTM4Q8IW00 320 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC83Q8IWF9 413 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 OXR1Q8N573 874 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC26Q8TAB7 109 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 SSH3Q8TE77 659 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZNF483Q8TF39 744 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 P3H4Q92791 437 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 MAP4K1Q92918 833 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 MKL1Q969V6 931 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 HOOK2Q96ED9 719 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC34Q96HJ3 373 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZNF396Q96N95 335 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 BAG1Q99933 345 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 NAA15Q9BXJ9 866 aaKnown RBP4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 IRF2BPLQ9H1B7 796 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 FAM204AQ9H8W3 233 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ACTR5Q9H9F9 607 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ATP6V0A4Q9HBG4 840 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 CD320Q9NPF0 282 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 KLC4Q9NSK0 619 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ETAA1Q9NY74 926 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 IFNKQ9P0W0 207 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 FAM8A1Q9UBU6 413 aa4.58□□□□□ -1.68
HMGB1P50-201ENST00000605814 ODF2LQ9ULJ1 636 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms