RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 MSH4O15457 936 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 PFKMP08237 780 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 CTSHP09668 335 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 ACTN1P12814 892 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 HOXC8P31273 242 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 SMAD3P84022 425 aaKnown RBP16.33■□□□□ 0.2
TUBE1-208ENST00000604743 GRIK4Q16099 956 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 LETM2Q2VYF4 491 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 GPR153Q6NV75 609 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 SWSAP1Q6NVH7 229 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 MIS18BP1Q6P0N0 1132 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 ABHD15Q6UXT9 468 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 PIK3AP1Q6ZUJ8 805 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 TRMT1LQ7Z2T5 733 aaKnown RBP16.33■□□□□ 0.2
TUBE1-208ENST00000604743 LENG9Q96B70 501 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 ZSCAN31Q96LW9 406 aaPredicted RBP16.33■□□□□ 0.2
TUBE1-208ENST00000604743 SAMM50Q9Y512 469 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 NRCAMQ92823 1304 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 MYO9BQ13459 2157 aa16.33■□□□□ 0.2
TUBE1-208ENST00000604743 RSPH10B2B2RC85 870 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 ATG7O95352 703 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 RSPH10BP0C881 870 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 INSRRP14616 1297 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 KRT2P35908 639 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 RBL2Q08999 1139 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 TRIM29Q14134 588 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 PLCB4Q15147 1175 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 RABEP1Q15276 862 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 ZNF697Q5TEC3 545 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 RASIP1Q5U651 963 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 FAM160B1Q5W0V3 765 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 PLPPR4Q7Z2D5 763 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 CCDC60Q8IWA6 550 aaPredicted RBP16.32■□□□□ 0.2
TUBE1-208ENST00000604743 ZBTB10Q96DT7 871 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 BRMS1Q9HCU9 246 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 ZNF302Q9NR11 478 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 SLC4A7Q9Y6M7 1214 aa16.32■□□□□ 0.2
TUBE1-208ENST00000604743 LOXHD1Q8IVV2 1947 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 POTEB3A0JP26 581 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 CHMP2AO43633 222 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 GAS7O60861 476 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 NBNO60934 754 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 ADAM17P78536 824 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 KRT76Q01546 638 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 GUCY1B3Q02153 619 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 NR5A1Q13285 461 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 GPNMBQ14956 572 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 Q4G0T1 1027 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 LRCH2Q5VUJ6 765 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 ZNF746Q6NUN9 644 aaPredicted RBP16.31■□□□□ 0.2
TUBE1-208ENST00000604743 TRAF7Q6Q0C0 670 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 POTEBQ6S5H4 581 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 RUFY4Q6ZNE9 571 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 CKAP2LQ8IYA6 745 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 TRAPPC12Q8WVT3 735 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 TUBE1Q9UJT0 475 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 GTF3C3Q9Y5Q9 886 aa16.31■□□□□ 0.2
TUBE1-208ENST00000604743 IGKV6D-21A0A0A0MT36 114 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 FAM205CA6NFA0 338 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 PARNO95453 639 aaKnown RBP16.3■□□□□ 0.2
TUBE1-208ENST00000604743 PSAPP07602 524 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 PBX2P40425 430 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 MBTPS1Q14703 1052 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 EARS2Q5JPH6 523 aaKnown RBP16.3■□□□□ 0.2
TUBE1-208ENST00000604743 KRT40Q6A162 431 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 PDXDC2PQ6P474 469 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 NEK8Q86SG6 692 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 SLC5A5Q92911 643 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 TNPO1Q92973 898 aaKnown RBP16.3■□□□□ 0.2
TUBE1-208ENST00000604743 TEKT3Q9BXF9 490 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 SH2B1Q9NRF2 756 aaPredicted RBP16.3■□□□□ 0.2
TUBE1-208ENST00000604743 DDX25Q9UHL0 483 aaKnown RBP16.3■□□□□ 0.2
TUBE1-208ENST00000604743 PCDHA10Q9Y5I2 948 aa16.3■□□□□ 0.2
TUBE1-208ENST00000604743 CYP3A7-CYP3A51PA0A087WV96 503 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 RRN3P2A6NIE6 340 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 BTBD18B2RXH4 712 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 SLC37A4O43826 429 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 ST18O60284 1047 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 CCNT1O60563 726 aaKnown RBP16.29■□□□□ 0.2
TUBE1-208ENST00000604743 CYP3A7P24462 503 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 DNAJB2P25686 324 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 RABGGTBP53611 331 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 MARCH8Q5T0T0 291 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 CNKSR3Q6P9H4 555 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 SMAP1Q8IYB5 467 aaPredicted RBP16.29■□□□□ 0.2
TUBE1-208ENST00000604743 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 RIT2Q99578 217 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 LLPHQ9BRT6 129 aaKnown RBP16.29■□□□□ 0.2
TUBE1-208ENST00000604743 PBX4Q9BYU1 374 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 FAM49AQ9H0Q0 323 aaPredicted RBP16.29■□□□□ 0.2
TUBE1-208ENST00000604743 UNC45AQ9H3U1 944 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 DISC1Q9NRI5 854 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 GABBR1Q9UBS5 961 aa16.29■□□□□ 0.2
TUBE1-208ENST00000604743 PTPRSQ13332 1948 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 WDR64B1ANS9 1081 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 MARCH6O60337 910 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 HBP1O60381 514 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 CXCL10P02778 98 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 MMP1P03956 469 aa16.28■□□□□ 0.2
TUBE1-208ENST00000604743 ATP2A2P16615 1042 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms