RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 PROB1E7EW31 1015 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ZNF213O14771 459 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 PER2O15055 1255 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 GALR2O43603 387 aaPredicted RBP13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 PPFIA3O75145 1194 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ATF7P17544 494 aaPredicted RBP13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 CD52P31358 61 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 PPFIA1Q13136 1202 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 SEMA3FQ13275 785 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 TSHZ1Q6ZSZ6 1077 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 HOMER1Q86YM7 354 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 NPAS4Q8IUM7 802 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 VN1R2Q8NFZ6 395 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 SUSD6Q92537 303 aa13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 AGO3Q9H9G7 860 aaKnown RBP13.63□□□□□ -0.23
PDLIM1P1-201ENST00000604187 PRR23AA6NEV1 266 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 FIBPO43427 364 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 NT5C2P49902 561 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 GATMP50440 423 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 MRPS9P82933 396 aaKnown RBP13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 SAMD3Q8N6K7 520 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 MICAL1Q8TDZ2 1067 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 DNAJB3Q8WWF6 145 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 MTMR8Q96EF0 704 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 RTEL1Q9NZ71 1219 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 TUBE1Q9UJT0 475 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 PCDHB15Q9Y5E8 787 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 CDY2AQ9Y6F7 541 aa13.62□□□□□ -0.23
PDLIM1P1-201ENST00000604187 NCOR2Q9Y618 2525 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 EPG5Q9HCE0 2579 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 IBSPP21815 317 aaPredicted RBP13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 SP100P23497 879 aaPredicted RBP13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 MARK3P27448 753 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 NUBP1P53384 320 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 MRPS6P82932 125 aaKnown RBP13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 GRIK4Q16099 956 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 CRIPAKQ8N1N5 446 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ATP8B4Q8TF62 1192 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ZBTB10Q96DT7 871 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 NEK1Q96PY6 1258 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 UBAC1Q9BSL1 405 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 FAM49AQ9H0Q0 323 aaPredicted RBP13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 TRPC6Q9Y210 931 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 FRMPD4Q14CM0 1322 aa13.61□□□□□ -0.23
PDLIM1P1-201ENST00000604187 STAM2O75886 525 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 STAG3L1P0CL83 205 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 SCG2P13521 617 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 TCF7P36402 384 aaPredicted RBP13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 PDE1AP54750 535 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 DUSP6Q16828 381 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 SLC35G1Q2M3R5 365 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 IFIT1BQ5T764 474 aaKnown RBP13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 RTN4RL1Q86UN2 441 aaPredicted RBP13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 RIPOR3Q96MK2 946 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 PIGSQ96S52 555 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 FTHL17Q9BXU8 183 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ZSWIM5Q9P217 1185 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 FAM186AA6NE01 2351 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ZNF292O60281 2723 aa13.6□□□□□ -0.23
PDLIM1P1-201ENST00000604187 MBLAC1A4D2B0 266 aaPredicted RBP13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 SRGAP2BP0DMP2 458 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 NBL1P41271 181 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 MFAP1P55081 439 aaKnown RBP13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 IGBP1P78318 339 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 TRAF1Q13077 416 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 MARCH8Q5T0T0 291 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ANKRD45Q5TZF3 282 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 ERMP1Q7Z2K6 904 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 TMEM105Q8N8V8 129 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 KREMEN2Q8NCW0 462 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 CDCA3Q99618 268 aaPredicted RBP13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 APOL5Q9BWW9 433 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 TSHZ2Q9NRE2 1034 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 RALGAPA2Q2PPJ7 1873 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 VPS13AQ96RL7 3174 aa13.59□□□□□ -0.23
PDLIM1P1-201ENST00000604187 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 TECP42680 631 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 UBE3AQ05086 875 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 TMEM62Q0P6H9 643 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 PAK2Q13177 524 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 MTMR3Q13615 1198 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 FRMD5Q7Z6J6 570 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 TICAM2Q86XR7 235 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 GLG1Q92896 1179 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 SENP7Q9BQF6 1050 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 S1PR5Q9H228 398 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 ERAP1Q9NZ08 941 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 LRFN2Q9ULH4 789 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 PADI3Q9ULW8 664 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 PCDHB12Q9Y5F1 795 aa13.58□□□□□ -0.24
PDLIM1P1-201ENST00000604187 PALM3A6NDB9 673 aaPredicted RBP13.57□□□□□ -0.24
PDLIM1P1-201ENST00000604187 FGF18O76093 207 aa13.57□□□□□ -0.24
PDLIM1P1-201ENST00000604187 ID4P47928 161 aa13.57□□□□□ -0.24
PDLIM1P1-201ENST00000604187 ERVFC1P60507 584 aa13.57□□□□□ -0.24
PDLIM1P1-201ENST00000604187 IER5Q5VY09 327 aa13.57□□□□□ -0.24
PDLIM1P1-201ENST00000604187 ANKRD54Q6NXT1 300 aa13.57□□□□□ -0.24
PDLIM1P1-201ENST00000604187 LLGL2Q6P1M3 1020 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms