RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 RPAINQ86UA6 219 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 NECAB1Q8N987 351 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 AIFM3Q96NN9 605 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 SLC9A7Q96T83 725 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 LLPHQ9BRT6 129 aaKnown RBP13.08□□□□□ -0.32
CCDC12-209ENST00000604164 TUBE1Q9UJT0 475 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 PCDHA10Q9Y5I2 948 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 IGKV6D-21A0A0A0MT36 114 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 ABHD14A-ACY1A0A1B0GW23 586 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 POTEB3A0JP26 581 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 MBLAC1A4D2B0 266 aaPredicted RBP13.07□□□□□ -0.32
CCDC12-209ENST00000604164 WDR64B1ANS9 1081 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 KIF28PB7ZC32 967 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 DHX15O43143 795 aaKnown RBP13.07□□□□□ -0.32
CCDC12-209ENST00000604164 ST18O60284 1047 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 HBP1O60381 514 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 GAS7O60861 476 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 CTDNEP1O95476 244 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 ATP2A2P16615 1042 aaKnown RBP13.07□□□□□ -0.32
CCDC12-209ENST00000604164 CYP3A7P24462 503 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 DNAJB2P25686 324 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 KRT2P35908 639 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 ADAM17P78536 824 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 IKBKEQ14164 716 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 PDXDC2PQ6P474 469 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 POTEBQ6S5H4 581 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 ABHD15Q6UXT9 468 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 NEK8Q86SG6 692 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 NSUN7Q8NE18 718 aaKnown RBP13.07□□□□□ -0.32
CCDC12-209ENST00000604164 RDM1Q8NG50 284 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 TIFAQ96CG3 184 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 FAM167AQ96KS9 214 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 TEKT3Q9BXF9 490 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 ZNF302Q9NR11 478 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 MTMR10Q9NXD2 777 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 KCNJ14Q9UNX9 436 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
CCDC12-209ENST00000604164 TANC1Q9C0D5 1861 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 M0QZ92 97 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 CCNE2O96020 404 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 INSRRP14616 1297 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 JAK3P52333 1124 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 HMGN5P82970 282 aaKnown RBP13.06□□□□□ -0.32
CCDC12-209ENST00000604164 HIC1Q14526 733 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 SAFBQ15424 915 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCDC12-209ENST00000604164 NPY5RQ15761 445 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 LRCH2Q5VUJ6 765 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 FAM43BQ6ZT52 329 aaPredicted RBP13.06□□□□□ -0.32
CCDC12-209ENST00000604164 CKAP2LQ8IYA6 745 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 ATP8B4Q8TF62 1192 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 LENG9Q96B70 501 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 PCYT2Q99447 389 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 CXXC1Q9P0U4 656 aaPredicted RBP13.06□□□□□ -0.32
CCDC12-209ENST00000604164 DDX25Q9UHL0 483 aaKnown RBP13.06□□□□□ -0.32
CCDC12-209ENST00000604164 CEP131Q9UPN4 1083 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 TELO2Q9Y4R8 837 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 PCDHA11Q9Y5I1 949 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 COL1A2P08123 1366 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 DOCK5Q9H7D0 1870 aa13.06□□□□□ -0.32
CCDC12-209ENST00000604164 MSH4O15457 936 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 NBNO60934 754 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 LARGE1O95461 756 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 IGBP1P78318 339 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 PLCB4Q15147 1175 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 INF2Q27J81 1249 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 LETM2Q2VYF4 491 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 ZNF484Q5JVG2 852 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 FAM26DQ5JW98 314 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 IER5Q5VY09 327 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 PPP4R3AQ6IN85 833 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 Q7L0L9 218 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 NME8Q8N427 588 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
CCDC12-209ENST00000604164 SEPT8Q92599 483 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 APBB2Q92870 758 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 SLC5A5Q92911 643 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 FAM20AQ96MK3 541 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 MBOAT7Q96N66 472 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 PBX4Q9BYU1 374 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 SEMA6BQ9H3T3 888 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 SLC28A3Q9HAS3 691 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 DISC1Q9NRI5 854 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 STXBP5LQ9Y2K9 1186 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 KIF3AQ9Y496 699 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 PCDHA2Q9Y5H9 948 aa13.05□□□□□ -0.32
CCDC12-209ENST00000604164 MAFBQ9Y5Q3 323 aaPredicted RBP13.05□□□□□ -0.32
CCDC12-209ENST00000604164 TBX3O15119 743 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 MARCH6O60337 910 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
CCDC12-209ENST00000604164 MMP1P03956 469 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 FDPSP14324 419 aaKnown RBP13.04□□□□□ -0.32
CCDC12-209ENST00000604164 MCM2P49736 904 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 TRAF7Q6Q0C0 670 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 PIK3AP1Q6ZUJ8 805 aa13.04□□□□□ -0.32
CCDC12-209ENST00000604164 CCDC60Q8IWA6 550 aaPredicted RBP13.04□□□□□ -0.32
CCDC12-209ENST00000604164 CCDC83Q8IWF9 413 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms