RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PRLRP16471 622 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 HSPA9P38646 679 aaKnown RBP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 PTDSS1P48651 473 aaKnown RBP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 KIF23Q02241 960 aaPredicted RBP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 CKAP4Q07065 602 aaKnown RBP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 PRKG1Q13976 671 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 NFE2L2Q16236 605 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 LIN52Q52LA3 116 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 EAPPQ56P03 285 aaPredicted RBP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 CCDC81Q6ZN84 652 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 DDX42Q86XP3 938 aaKnown RBP eCLIP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 BBS5Q8N3I7 341 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 ANKS4BQ8N8V4 417 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 GATA6Q92908 595 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 SPATA17Q96L03 361 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 IFT74Q96LB3 600 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 NUF2Q9BZD4 464 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 ESF1Q9H501 851 aaKnown RBP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 ZSWIM4Q9H7M6 989 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 RNPEPL1Q9HAU8 725 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 ETNK2Q9NVF9 386 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 ZBTB1Q9Y2K1 713 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 HBS1LQ9Y450 684 aaKnown RBP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 CLTCQ00610 1675 aaKnown RBP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 AP3B1O00203 1094 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 FBP2O00757 339 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 CDK2AP1O14519 115 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 PDE5AO76074 875 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 S100A6P06703 90 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 RGS2P41220 211 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 ALDH5A1P51649 535 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-215ENST00000602574 EMP3P54852 163 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 AMPD2Q01433 879 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 BNIP1Q12981 228 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 TNIP1Q15025 636 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 MYLK3Q32MK0 819 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 ZNF746Q6NUN9 644 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-215ENST00000602574 PPP1R42Q7Z4L9 355 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 NUP93Q8N1F7 819 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 RBBP8NLQ8NC74 664 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-215ENST00000602574 LPIN2Q92539 896 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 SEC62Q99442 399 aaKnown RBP9.59□□□□□ -0.87
COMMD3-215ENST00000602574 UNKQ9C0B0 810 aaKnown RBP9.59□□□□□ -0.87
COMMD3-215ENST00000602574 CEP44Q9C0F1 390 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 TAF1DQ9H5J8 278 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-215ENST00000602574 ANO2Q9NQ90 1003 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 IFNKQ9P0W0 207 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 ZNHIT2Q9UHR6 403 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 EXOC7Q9UPT5 735 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 NOTOA8MTQ0 251 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 UPP2O95045 317 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 PDHA1P08559 390 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 CHRNB1P11230 501 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 HOXB1P14653 301 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-215ENST00000602574 NAGAP17050 411 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 M6PRP20645 277 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 IL32P24001 234 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 CASP14P31944 242 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 ATN1P54259 1190 aaPredicted RBP9.59□□□□□ -0.87
COMMD3-215ENST00000602574 EPHB4P54760 987 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 NLRP6P59044 892 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 UBXN2AP68543 259 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 METTL21CQ5VZV1 264 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 CAPN12Q6ZSI9 719 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 VSTM4Q8IW00 320 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 TMEM57Q8N5G2 664 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 AOPEPQ8N6M6 819 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 APPL2Q8NEU8 664 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 ASAP3Q8TDY4 903 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 SSH1Q8WYL5 1049 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 FNBP1Q96RU3 617 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 NDFIP2Q9NV92 336 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 TBK1Q9UHD2 729 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 ZNF711Q9Y462 761 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 PCDHB4Q9Y5E5 795 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 MYH15Q9Y2K3 1946 aa9.59□□□□□ -0.87
COMMD3-215ENST00000602574 NVLO15381 856 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 IFIT2P09913 472 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 VAV1P15498 845 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 KCNA3P22001 575 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ETFBP38117 255 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 AP3M2P53677 418 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 NLRP12P59046 1061 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 POLR2FP61218 127 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 OCRLQ01968 901 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 GUCY1A3Q02108 690 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 R3HDM1Q15032 1099 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ZCWPW2Q504Y3 356 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 CCDC102BQ68D86 513 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 UNC13DQ70J99 1090 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 PATL1Q86TB9 770 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 CAND1Q86VP6 1230 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ZBED8Q8IZ13 594 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 CADM3Q8N126 398 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 CCDC197Q8NCU1 140 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 SVIPQ8NHG7 77 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 NAT14Q8WUY8 206 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ARL8AQ96BM9 186 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ARHGEF3Q9NR81 526 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms