RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 AZI2Q9H6S1 392 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 STARD7Q9NQZ5 370 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 PHF24Q9UPV7 400 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 SAMM50Q9Y512 469 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 PCDHB6Q9Y5E3 794 aa11.33□□□□□ -0.6
UPF1-213ENST00000601981 MYADML2A6NDP7 307 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 WDR64B1ANS9 1081 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 DDX39AO00148 427 aaKnown RBP11.32□□□□□ -0.6
UPF1-213ENST00000601981 OR52Z1P0C646 297 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 XRCC6P12956 609 aaKnown RBP eCLIP11.32□□□□□ -0.6
UPF1-213ENST00000601981 MARCKSP29966 332 aaPredicted RBP11.32□□□□□ -0.6
UPF1-213ENST00000601981 ITGB3BPQ13352 177 aaPredicted RBP11.32□□□□□ -0.6
UPF1-213ENST00000601981 ZNF174Q15697 407 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 HSDL1Q3SXM5 330 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 TMEM63BQ5T3F8 832 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 FAM160B1Q5W0V3 765 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 RESP18Q5W5W9 173 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 MIS18BP1Q6P0N0 1132 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 FMR1NBQ8N0W7 255 aaPredicted RBP11.32□□□□□ -0.6
UPF1-213ENST00000601981 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
UPF1-213ENST00000601981 RDM1Q8NG50 284 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 ETNPPLQ8TBG4 499 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 PAWRQ96IZ0 340 aaKnown RBP11.32□□□□□ -0.6
UPF1-213ENST00000601981 GPR20Q99678 358 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 FUCA2Q9BTY2 467 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
UPF1-213ENST00000601981 KCNMB3Q9NPA1 279 aa11.32□□□□□ -0.6
UPF1-213ENST00000601981 FBXO2Q9UK22 296 aaPredicted RBP11.32□□□□□ -0.6
UPF1-213ENST00000601981 LOXHD1Q8IVV2 1947 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 A0A0U1RQG5 324 aaPredicted RBP11.31□□□□□ -0.6
UPF1-213ENST00000601981 A0A1W2PQ45 241 aaPredicted RBP11.31□□□□□ -0.6
UPF1-213ENST00000601981 A0A1W2PQY0 241 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 BACH1O14867 736 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 PSAPP07602 524 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 HOXD8P13378 290 aaPredicted RBP11.31□□□□□ -0.6
UPF1-213ENST00000601981 PFKFB1P16118 471 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 TCF7P36402 384 aaPredicted RBP11.31□□□□□ -0.6
UPF1-213ENST00000601981 NDUFA8P51970 172 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 ACTR2P61160 394 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 PURAQ00577 322 aaKnown RBP11.31□□□□□ -0.6
UPF1-213ENST00000601981 CCSAPQ6IQ19 270 aaPredicted RBP11.31□□□□□ -0.6
UPF1-213ENST00000601981 CXCL17Q6UXB2 119 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 MIER3Q7Z3K6 550 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 GLG1Q92896 1179 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 FERMT2Q96AC1 680 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 TIGD1Q96MW7 591 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 SMARCAD1Q9H4L7 1026 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 PCDHA12Q9UN75 941 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 HPSEQ9Y251 543 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 PCDHA10Q9Y5I2 948 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 SRPRBQ9Y5M8 271 aaKnown RBP11.31□□□□□ -0.6
UPF1-213ENST00000601981 STK24Q9Y6E0 443 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 MROH7Q68CQ1 1323 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 EMSYQ7Z589 1322 aa11.31□□□□□ -0.6
UPF1-213ENST00000601981 A0A1B0GVL5 298 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 DHX15O43143 795 aaKnown RBP11.3□□□□□ -0.6
UPF1-213ENST00000601981 CHMP2AO43633 222 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 EDIL3O43854 480 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 DKC1O60832 514 aaKnown RBP eCLIP11.3□□□□□ -0.6
UPF1-213ENST00000601981 PSMD10O75832 226 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 LGALS2P05162 132 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 SUPT20HL2P0C7V6 817 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 CCDC192P0DO97 292 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 PTGS1P23219 599 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 TXKP42681 527 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 SLC26A2P50443 739 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 ATP2C1P98194 919 aaPredicted RBP11.3□□□□□ -0.6
UPF1-213ENST00000601981 PPP2R5CQ13362 524 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 UTP14CQ5TAP6 766 aaKnown RBP11.3□□□□□ -0.6
UPF1-213ENST00000601981 SHC4Q6S5L8 630 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 ERMNQ8TAM6 284 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 DIS3LQ8TF46 1054 aaKnown RBP11.3□□□□□ -0.6
UPF1-213ENST00000601981 ATP6V0A1Q93050 837 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 RBSNQ9H1K0 784 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
UPF1-213ENST00000601981 DISC1Q9NRI5 854 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 ERAP1Q9NZ08 941 aa11.3□□□□□ -0.6
UPF1-213ENST00000601981 TRIP12Q14669 1992 aaPredicted RBP11.29□□□□□ -0.6
UPF1-213ENST00000601981 GSTTP1A0A1W2PQM5 241 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 H3BRB1 525 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
UPF1-213ENST00000601981 F2P00734 622 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 ZNF286BP0CG31 522 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 COL6A1P12109 1028 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 PRPHP41219 470 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 PSEN2P49810 448 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 STAT5BP51692 787 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 CHMP4BP1P59074 171 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 IRX5P78411 483 aaPredicted RBP11.29□□□□□ -0.6
UPF1-213ENST00000601981 PTPN11Q06124 597 aaPredicted RBP11.29□□□□□ -0.6
UPF1-213ENST00000601981 PTGDRQ13258 359 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 ITGA7Q13683 1181 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 CAMK4Q16566 473 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
UPF1-213ENST00000601981 NCAPH2Q6IBW4 605 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 PLPPR4Q7Z2D5 763 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 C7orf31Q8N865 590 aa11.29□□□□□ -0.6
UPF1-213ENST00000601981 NEK9Q8TD19 979 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms