RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 IKBKBO14920 756 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 DKC1O60832 514 aaKnown RBP eCLIP20.05■□□□□ 0.86e-11■■■■■ 26.8
VRK3-225ENST00000601912 IDEP14735 1019 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 CYP11B2P19099 503 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 ERCC5P28715 1186 aaPredicted RBP20.05■□□□□ 0.8
VRK3-225ENST00000601912 APLP1P51693 650 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 PSMC5P62195 406 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 SP2Q02086 613 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 CRHR2Q13324 411 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 MIS18BP1Q6P0N0 1132 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 ARMCX2Q7L311 632 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 CYFIP1Q7L576 1253 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 PIGOQ8TEQ8 1089 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 ZIC5Q96T25 663 aa20.05■□□□□ 0.8
VRK3-225ENST00000601912 LYPLA2O95372 231 aa20.04■□□□□ 0.8
VRK3-225ENST00000601912 UBA1P22314 1058 aaKnown RBP20.04■□□□□ 0.8
VRK3-225ENST00000601912 ACTR2P61160 394 aa20.04■□□□□ 0.8
VRK3-225ENST00000601912 STIM1Q13586 685 aa20.04■□□□□ 0.8
VRK3-225ENST00000601912 CCDC65Q8IXS2 484 aa20.04■□□□□ 0.8
VRK3-225ENST00000601912 CAPNS2Q96L46 248 aa20.04■□□□□ 0.8
VRK3-225ENST00000601912 MYL5Q02045 173 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 SP4Q02446 784 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 PSMD2Q13200 908 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 C4orf19Q8IY42 314 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 ATP6V0A1Q93050 837 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 DNAJC19Q96DA6 116 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 WRAP73Q9P2S5 460 aaPredicted RBP20.03■□□□□ 0.8
VRK3-225ENST00000601912 PPP1R2P41236 205 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 PLCB2Q00722 1185 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 TTLL4Q14679 1199 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 MAMDC4Q6UXC1 1216 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 FBXO16Q8IX29 292 aaPredicted RBP20.03■□□□□ 0.8
VRK3-225ENST00000601912 SMYD4Q8IYR2 804 aaPredicted RBP20.03■□□□□ 0.8
VRK3-225ENST00000601912 SCFD2Q8WU76 684 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 BCAS3Q9H6U6 928 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 MLXIPQ9HAP2 919 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 VTA1Q9NP79 307 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 PANK4Q9NVE7 773 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 KCND2Q9NZV8 630 aa20.03■□□□□ 0.8
VRK3-225ENST00000601912 DDX41Q9UJV9 622 aaKnown RBP20.03■□□□□ 0.8
VRK3-225ENST00000601912 PLXNA1Q9UIW2 1896 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 ARHGEF35A5YM69 484 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 PPP1R3GB7ZBB8 358 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 ARSHQ5FYA8 562 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 MORN1Q5T089 497 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 KLHL10Q6JEL2 608 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 METTL7BQ6UX53 244 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 ABHD15Q6UXT9 468 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 MSL3Q8N5Y2 521 aaKnown RBP20.02■□□□□ 0.8
VRK3-225ENST00000601912 ENOX1Q8TC92 643 aaKnown RBP20.02■□□□□ 0.8
VRK3-225ENST00000601912 MAML3Q96JK9 1138 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 CCDC43Q96MW1 224 aaKnown RBP20.02■□□□□ 0.8
VRK3-225ENST00000601912 DBR1Q9UK59 544 aaKnown RBP20.02■□□□□ 0.8
VRK3-225ENST00000601912 GDAQ9Y2T3 454 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 LRRC37A2A6NM11 1700 aa20.02■□□□□ 0.8
VRK3-225ENST00000601912 SORBS3O60504 671 aa20.01■□□□□ 0.79
VRK3-225ENST00000601912 FARP2O94887 1054 aaPredicted RBP20.01■□□□□ 0.79
VRK3-225ENST00000601912 GGPS1O95749 300 aa20.01■□□□□ 0.79
VRK3-225ENST00000601912 SUPT20HL2P0C7V6 817 aa20.01■□□□□ 0.79
VRK3-225ENST00000601912 YWHABP31946 246 aaKnown RBP20.01■□□□□ 0.79
VRK3-225ENST00000601912 MAP2K5Q13163 448 aa20.01■□□□□ 0.79
VRK3-225ENST00000601912 LY6KQ17RY6 165 aa20.01■□□□□ 0.79
VRK3-225ENST00000601912 RINT1Q6NUQ1 792 aa20.01■□□□□ 0.79
VRK3-225ENST00000601912 SWSAP1Q6NVH7 229 aa20.01■□□□□ 0.79
VRK3-225ENST00000601912 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.01■□□□□ 0.79
VRK3-225ENST00000601912 GABBR1Q9UBS5 961 aa20.01■□□□□ 0.79
VRK3-225ENST00000601912 BACH1O14867 736 aa20■□□□□ 0.79
VRK3-225ENST00000601912 ZBTB39O15060 712 aa20■□□□□ 0.79
VRK3-225ENST00000601912 ATG7O95352 703 aa20■□□□□ 0.79
VRK3-225ENST00000601912 TXNP10599 105 aaKnown RBP20■□□□□ 0.79
VRK3-225ENST00000601912 CD44P16070 742 aaKnown RBP20■□□□□ 0.79
VRK3-225ENST00000601912 PRCPP42785 496 aa20■□□□□ 0.79
VRK3-225ENST00000601912 COASYQ13057 564 aa20■□□□□ 0.79
VRK3-225ENST00000601912 GIT2Q14161 759 aa20■□□□□ 0.79
VRK3-225ENST00000601912 OTUD6AQ7L8S5 288 aa20■□□□□ 0.79
VRK3-225ENST00000601912 NPHP3-ACAD11A0A0J9YXS1 232 aa20■□□□□ 0.79
VRK3-225ENST00000601912 PSMA7O14818 248 aa20■□□□□ 0.79
VRK3-225ENST00000601912 AOC2O75106 756 aa20■□□□□ 0.79
VRK3-225ENST00000601912 TBCAO75347 108 aaKnown RBP20■□□□□ 0.79
VRK3-225ENST00000601912 RAD51AP2Q09MP3 1159 aa20■□□□□ 0.79
VRK3-225ENST00000601912 STK4Q13043 487 aa20■□□□□ 0.79
VRK3-225ENST00000601912 PAK1Q13153 545 aa20■□□□□ 0.79
VRK3-225ENST00000601912 NCAPHQ15003 741 aa20■□□□□ 0.79
VRK3-225ENST00000601912 UGCGQ16739 394 aa20■□□□□ 0.79
VRK3-225ENST00000601912 CELF3Q5SZQ8 465 aaKnown RBP20■□□□□ 0.79
VRK3-225ENST00000601912 CCDC62Q6P9F0 684 aa20■□□□□ 0.79
VRK3-225ENST00000601912 C1orf186Q6ZWK4 172 aa20■□□□□ 0.79
VRK3-225ENST00000601912 DHX37Q8IY37 1157 aaKnown RBP20■□□□□ 0.79
VRK3-225ENST00000601912 ADSSL1Q8N142 457 aa20■□□□□ 0.79
VRK3-225ENST00000601912 SOCS4Q8WXH5 440 aa20■□□□□ 0.79
VRK3-225ENST00000601912 REEP2Q9BRK0 252 aa20■□□□□ 0.79
VRK3-225ENST00000601912 TINF2Q9BSI4 451 aa20■□□□□ 0.79
VRK3-225ENST00000601912 RUSC1Q9BVN2 902 aa20■□□□□ 0.79
VRK3-225ENST00000601912 ZHX3Q9H4I2 956 aa20■□□□□ 0.79
VRK3-225ENST00000601912 ANKEF1Q9NU02 776 aa20■□□□□ 0.79
VRK3-225ENST00000601912 SYNGAP1Q96PV0 1343 aa20■□□□□ 0.79
VRK3-225ENST00000601912 ZNF236Q9UL36 1845 aa20■□□□□ 0.79
VRK3-225ENST00000601912 LOXHD1Q8IVV2 1947 aa20■□□□□ 0.79
VRK3-225ENST00000601912 MCM3APO60318 1980 aa19.99■□□□□ 0.79
VRK3-225ENST00000601912 TNPO2O14787 897 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms