RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 MCM4P33991 863 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 PDIA5Q14554 519 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 ADALQ6DHV7 355 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
USE1-210ENST00000601662 KAT2BQ92831 832 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 LENG9Q96B70 501 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 UIMC1Q96RL1 719 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 RIT2Q99578 217 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 ZNF577Q9BSK1 485 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 TMEM60Q9H2L4 133 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 PRO3102Q9H379 93 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 GDPD2Q9HCC8 539 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 KCNH7Q9NS40 1196 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 TRMT13Q9NUP7 481 aaKnown RBP16.27■□□□□ 0.2
USE1-210ENST00000601662 PCDHA12Q9UN75 941 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 TELO2Q9Y4R8 837 aa16.27■□□□□ 0.2
USE1-210ENST00000601662 MYH15Q9Y2K3 1946 aa16.27■□□□□ 0.19
USE1-210ENST00000601662 TCHHQ07283 1943 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 IPO5O00410 1097 aaKnown RBP16.26■□□□□ 0.19
USE1-210ENST00000601662 MSH4O15457 936 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 PPFIA4O75335 1185 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 PRPF40AO75400 957 aaKnown RBP16.26■□□□□ 0.19
USE1-210ENST00000601662 CD4P01730 458 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 BMP8BP34820 402 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 LONP1P36776 959 aaKnown RBP16.26■□□□□ 0.19
USE1-210ENST00000601662 TXKP42681 527 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 PSEN2P49810 448 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
USE1-210ENST00000601662 METTL7BQ6UX53 244 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 GIMAP8Q8ND71 665 aaPredicted RBP16.26■□□□□ 0.19
USE1-210ENST00000601662 ETNPPLQ8TBG4 499 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 HAS1Q92839 578 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 AK8Q96MA6 479 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 TBC1D22BQ9NU19 505 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 FBXO2Q9UK22 296 aaPredicted RBP16.26■□□□□ 0.19
USE1-210ENST00000601662 TBX21Q9UL17 535 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 PCDHA7Q9UN72 937 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 STK24Q9Y6E0 443 aa16.26■□□□□ 0.19
USE1-210ENST00000601662 TIMP1P01033 207 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 ARP10275 920 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 CYP2C9P11712 490 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 CYP2C18P33260 490 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
USE1-210ENST00000601662 MFSD10Q14728 455 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 KIAA0753Q2KHM9 967 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 NFRKBQ6P4R8 1299 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 SENP7Q9BQF6 1050 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 TTC12Q9H892 705 aaPredicted RBP16.25■□□□□ 0.19
USE1-210ENST00000601662 AGO4Q9HCK5 861 aaKnown RBP16.25■□□□□ 0.19
USE1-210ENST00000601662 TCEAL9Q9UHQ7 104 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 NOD1Q9Y239 953 aa16.25■□□□□ 0.19
USE1-210ENST00000601662 A0A1W2PQ27 194 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 A0A1W2PQ64 194 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 A0A1W2PQD8 194 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 VWA3AA6NCI4 1184 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 SUPT20HL2P0C7V6 817 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 KCNA2P16389 499 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 UBE2HP62256 183 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 LRCH2Q5VUJ6 765 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 C7orf31Q8N865 590 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 GPR20Q99678 358 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 SDF4Q9BRK5 362 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 HIPK3Q9H422 1215 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 HDAC6Q9UBN7 1215 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 DOCK5Q9H7D0 1870 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 RANBP2P49792 3224 aaKnown RBP16.24■□□□□ 0.19
USE1-210ENST00000601662 SCN10AQ9Y5Y9 1956 aa16.24■□□□□ 0.19
USE1-210ENST00000601662 UMODL1Q5DID0 1318 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 GAS7O60861 476 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 LGALS2P05162 132 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 CMA1P23946 247 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 TECP42680 631 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 CCL23P55773 120 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 FPGSQ05932 587 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 AXDND1Q5T1B0 1012 aaPredicted RBP16.23■□□□□ 0.19
USE1-210ENST00000601662 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 TDHQ8IZJ6 230 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 C16orf70Q9BSU1 422 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 KATNAL1Q9BW62 490 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 TEKT3Q9BXF9 490 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 LMBRD1Q9NUN5 540 aa16.23■□□□□ 0.19
USE1-210ENST00000601662 NFASCO94856 1347 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 H3BRB1 525 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 DDX39AO00148 427 aaKnown RBP16.22■□□□□ 0.19
USE1-210ENST00000601662 SLC26A4O43511 780 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 PSMD10O75832 226 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 F2P00734 622 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 HOXD8P13378 290 aaPredicted RBP16.22■□□□□ 0.19
USE1-210ENST00000601662 EPHB4P54760 987 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 PTPN11Q06124 597 aaPredicted RBP16.22■□□□□ 0.19
USE1-210ENST00000601662 PTGISQ16647 500 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 GDF6Q6KF10 455 aaPredicted RBP16.22■□□□□ 0.19
USE1-210ENST00000601662 MFSD5Q6N075 450 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 IGSF22Q8N9C0 903 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 SEPT1Q8WYJ6 367 aa16.22■□□□□ 0.19
USE1-210ENST00000601662 NOC4LQ9BVI4 516 aaKnown RBP16.22■□□□□ 0.19
USE1-210ENST00000601662 CSRNP2Q9H175 543 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms