RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ZNF215Q9UL58 517 aaPredicted RBP18.55■□□□□ 0.56
SSBP4-211ENST00000601614 CDY2AQ9Y6F7 541 aa18.55■□□□□ 0.56
SSBP4-211ENST00000601614 RIF1Q5UIP0 2472 aaKnown RBP18.54■□□□□ 0.56
SSBP4-211ENST00000601614 PALM3A6NDB9 673 aaPredicted RBP18.54■□□□□ 0.56
SSBP4-211ENST00000601614 CYTH3O43739 400 aa18.54■□□□□ 0.56
SSBP4-211ENST00000601614 PDGFBP01127 241 aaPredicted RBP18.54■□□□□ 0.56
SSBP4-211ENST00000601614 AVPR2P30518 371 aa18.54■□□□□ 0.56
SSBP4-211ENST00000601614 SEC23AQ15436 765 aa18.54■□□□□ 0.56
SSBP4-211ENST00000601614 GNPTABQ3T906 1256 aa18.54■□□□□ 0.56
SSBP4-211ENST00000601614 PAN2Q504Q3 1202 aaKnown RBP18.54■□□□□ 0.56
SSBP4-211ENST00000601614 TICAM2Q86XR7 235 aa18.54■□□□□ 0.56
SSBP4-211ENST00000601614 CMTR2Q8IYT2 770 aaKnown RBP18.54■□□□□ 0.56
SSBP4-211ENST00000601614 DNAJB3Q8WWF6 145 aa18.54■□□□□ 0.56
SSBP4-211ENST00000601614 ZBTB10Q96DT7 871 aa18.54■□□□□ 0.56
SSBP4-211ENST00000601614 FAM186AA6NE01 2351 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 FIBPO43427 364 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 SDSP20132 328 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 CD52P31358 61 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 NT5C2P49902 561 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 MARCH8Q5T0T0 291 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 IFIT1BQ5T764 474 aaKnown RBP18.53■□□□□ 0.56
SSBP4-211ENST00000601614 TAF2Q6P1X5 1199 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 TSHZ1Q6ZSZ6 1077 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 SUSD6Q92537 303 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 PPP2R3CQ969Q6 453 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 RILPL2Q969X0 211 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 RIOX1Q9H6W3 641 aa18.53■□□□□ 0.56
SSBP4-211ENST00000601614 MBLAC1A4D2B0 266 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-211ENST00000601614 H0Y858 1186 aa18.52■□□□□ 0.56
SSBP4-211ENST00000601614 PER2O15055 1255 aa18.52■□□□□ 0.56
SSBP4-211ENST00000601614 MARK3P27448 753 aa18.52■□□□□ 0.56
SSBP4-211ENST00000601614 PPFIA1Q13136 1202 aa18.52■□□□□ 0.56
SSBP4-211ENST00000601614 NAALADL2Q58DX5 795 aa18.52■□□□□ 0.56
SSBP4-211ENST00000601614 CYB5R4Q7L1T6 521 aa18.52■□□□□ 0.56
SSBP4-211ENST00000601614 ATOH1Q92858 354 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-211ENST00000601614 TLR9Q9NR96 1032 aa18.52■□□□□ 0.56
SSBP4-211ENST00000601614 TUBE1Q9UJT0 475 aa18.52■□□□□ 0.56
SSBP4-211ENST00000601614 STAM2O75886 525 aa18.51■□□□□ 0.55
SSBP4-211ENST00000601614 TCF7P36402 384 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-211ENST00000601614 GRIK4Q16099 956 aa18.51■□□□□ 0.55
SSBP4-211ENST00000601614 NPAS4Q8IUM7 802 aa18.51■□□□□ 0.55
SSBP4-211ENST00000601614 ATP8B4Q8TF62 1192 aa18.51■□□□□ 0.55
SSBP4-211ENST00000601614 UBAC1Q9BSL1 405 aa18.51■□□□□ 0.55
SSBP4-211ENST00000601614 ATP9AO75110 1047 aa18.5■□□□□ 0.55
SSBP4-211ENST00000601614 PPFIA3O75145 1194 aa18.5■□□□□ 0.55
SSBP4-211ENST00000601614 ATF7P17544 494 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-211ENST00000601614 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
SSBP4-211ENST00000601614 MRPS6P82932 125 aaKnown RBP18.5■□□□□ 0.55
SSBP4-211ENST00000601614 GRM4Q14833 912 aa18.5■□□□□ 0.55
SSBP4-211ENST00000601614 CWC27Q6UX04 472 aaKnown RBP18.5■□□□□ 0.55
SSBP4-211ENST00000601614 ASCL5Q7RTU5 278 aa18.5■□□□□ 0.55
SSBP4-211ENST00000601614 SENP7Q9BQF6 1050 aa18.5■□□□□ 0.55
SSBP4-211ENST00000601614 TLE6Q9H808 572 aa18.5■□□□□ 0.55
SSBP4-211ENST00000601614 SENP2Q9HC62 589 aa18.5■□□□□ 0.55
SSBP4-211ENST00000601614 DMDP11532 3685 aa18.49■□□□□ 0.55
SSBP4-211ENST00000601614 GSTTP1A0A1W2PQM5 241 aa18.49■□□□□ 0.55
SSBP4-211ENST00000601614 PTPN21Q16825 1174 aa18.49■□□□□ 0.55
SSBP4-211ENST00000601614 RSPH3Q86UC2 560 aa18.49■□□□□ 0.55
SSBP4-211ENST00000601614 KRT23Q9C075 422 aa18.49■□□□□ 0.55
SSBP4-211ENST00000601614 HCSTQ9UBK5 93 aa18.49■□□□□ 0.55
SSBP4-211ENST00000601614 ZBTB47Q9UFB7 747 aaPredicted RBP18.49■□□□□ 0.55
SSBP4-211ENST00000601614 PNMA6FA0A0J9YX94 578 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 PROB1E7EW31 1015 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 KCNA2P16389 499 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 ERVFC1P60507 584 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 IGBP1P78318 339 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 TMEM62Q0P6H9 643 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 IMMTQ16891 758 aaKnown RBP18.48■□□□□ 0.55
SSBP4-211ENST00000601614 PCNX4Q63HM2 1172 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 USP17L6PQ6QN14 398 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 DSCC1Q9BVC3 393 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 LNPKQ9C0E8 428 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 FAM49AQ9H0Q0 323 aaPredicted RBP18.48■□□□□ 0.55
SSBP4-211ENST00000601614 S1PR5Q9H228 398 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 IL25Q9H293 177 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 TMX1Q9H3N1 280 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 PADI3Q9ULW8 664 aa18.48■□□□□ 0.55
SSBP4-211ENST00000601614 DCHS1Q96JQ0 3298 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 SCG2P13521 617 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 SP100P23497 879 aaPredicted RBP18.47■□□□□ 0.55
SSBP4-211ENST00000601614 KCNC3Q14003 757 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 DUSP6Q16828 381 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 RIPOR3Q96MK2 946 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 PCYT2Q99447 389 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 ERAP1Q9NZ08 941 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 CDH22Q9UJ99 828 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 EVPLQ92817 2033 aa18.47■□□□□ 0.55
SSBP4-211ENST00000601614 MEIS2O14770 477 aa18.46■□□□□ 0.55
SSBP4-211ENST00000601614 IBSPP21815 317 aaPredicted RBP18.46■□□□□ 0.55
SSBP4-211ENST00000601614 MICAL1Q8TDZ2 1067 aa18.46■□□□□ 0.55
SSBP4-211ENST00000601614 APOL5Q9BWW9 433 aa18.46■□□□□ 0.55
SSBP4-211ENST00000601614 FTHL17Q9BXU8 183 aa18.46■□□□□ 0.55
SSBP4-211ENST00000601614 CNNM2Q9H8M5 875 aa18.46■□□□□ 0.55
SSBP4-211ENST00000601614 TRPV2Q9Y5S1 764 aa18.46■□□□□ 0.55
SSBP4-211ENST00000601614 SQORQ9Y6N5 450 aa18.46■□□□□ 0.55
SSBP4-211ENST00000601614 IGSF9BQ9UPX0 1349 aa18.46■□□□□ 0.55
SSBP4-211ENST00000601614 PRR23AA6NEV1 266 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 FSCN2O14926 492 aa18.45■□□□□ 0.54
SSBP4-211ENST00000601614 GALR2O43603 387 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms