RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 SPTBN5Q9NRC6 3674 aaKnown RBP25.82■■□□□ 1.72
SSBP4-209ENST00000601357 LCHNA4D1U4 455 aa25.81■■□□□ 1.72
SSBP4-209ENST00000601357 IGFBP4P22692 258 aa25.81■■□□□ 1.72
SSBP4-209ENST00000601357 CCT2P78371 535 aaKnown RBP25.81■■□□□ 1.72
SSBP4-209ENST00000601357 TAF2Q6P1X5 1199 aa25.81■■□□□ 1.72
SSBP4-209ENST00000601357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.81■■□□□ 1.72
SSBP4-209ENST00000601357 SLC26A6Q9BXS9 759 aa25.81■■□□□ 1.72
SSBP4-209ENST00000601357 TUBE1Q9UJT0 475 aa25.81■■□□□ 1.72
SSBP4-209ENST00000601357 EPOPA6NHQ4 379 aa25.8■■□□□ 1.72
SSBP4-209ENST00000601357 CHRNA1P02708 482 aa25.8■■□□□ 1.72
SSBP4-209ENST00000601357 POU3F3P20264 500 aaPredicted RBP25.8■■□□□ 1.72
SSBP4-209ENST00000601357 GNA11P29992 359 aa25.8■■□□□ 1.72
SSBP4-209ENST00000601357 ZNF76P36508 570 aa25.8■■□□□ 1.72
SSBP4-209ENST00000601357 AKAP17AQ02040 695 aaKnown RBP25.8■■□□□ 1.72
SSBP4-209ENST00000601357 PLPPR4Q7Z2D5 763 aa25.8■■□□□ 1.72
SSBP4-209ENST00000601357 ZNF274Q96GC6 653 aaPredicted RBP25.8■■□□□ 1.72
SSBP4-209ENST00000601357 RAD9AQ99638 391 aa25.8■■□□□ 1.72
SSBP4-209ENST00000601357 ZBED2Q9BTP6 218 aa25.8■■□□□ 1.72
SSBP4-209ENST00000601357 COL25A1Q9BXS0 654 aaPredicted RBP25.8■■□□□ 1.72
SSBP4-209ENST00000601357 XIRP2A4UGR9 3374 aa25.79■■□□□ 1.72
SSBP4-209ENST00000601357 IGKV6D-21A0A0A0MT36 114 aa25.79■■□□□ 1.72
SSBP4-209ENST00000601357 DHX15O43143 795 aaKnown RBP25.79■■□□□ 1.72
SSBP4-209ENST00000601357 PPFIA3O75145 1194 aa25.79■■□□□ 1.72
SSBP4-209ENST00000601357 CCNE2O96020 404 aa25.79■■□□□ 1.72
SSBP4-209ENST00000601357 MGAT3Q09327 533 aa25.79■■□□□ 1.72
SSBP4-209ENST00000601357 SPRED2Q7Z698 418 aa25.79■■□□□ 1.72
SSBP4-209ENST00000601357 SEPT8Q92599 483 aa25.79■■□□□ 1.72
SSBP4-209ENST00000601357 UPF3BQ9BZI7 483 aaKnown RBP25.79■■□□□ 1.72
SSBP4-209ENST00000601357 AZI2Q9H6S1 392 aa25.79■■□□□ 1.72
SSBP4-209ENST00000601357 CERS4Q9HA82 394 aa25.79■■□□□ 1.72
SSBP4-209ENST00000601357 COL4A4P53420 1690 aaPredicted RBP25.79■■□□□ 1.72
SSBP4-209ENST00000601357 RRN3P2A6NIE6 340 aa25.78■■□□□ 1.72
SSBP4-209ENST00000601357 RFXAPO00287 272 aa25.78■■□□□ 1.72
SSBP4-209ENST00000601357 INSRRP14616 1297 aa25.78■■□□□ 1.72
SSBP4-209ENST00000601357 PLA2G4DQ86XP0 818 aa25.78■■□□□ 1.72
SSBP4-209ENST00000601357 CCDC148Q8NFR7 591 aa25.78■■□□□ 1.72
SSBP4-209ENST00000601357 SH3GLB2Q9NR46 395 aa25.78■■□□□ 1.72
SSBP4-209ENST00000601357 AMHP03971 560 aa25.77■■□□□ 1.72
SSBP4-209ENST00000601357 STAT5BP51692 787 aa25.77■■□□□ 1.72
SSBP4-209ENST00000601357 PLCB4Q15147 1175 aa25.77■■□□□ 1.72
SSBP4-209ENST00000601357 ABHD15Q6UXT9 468 aa25.77■■□□□ 1.72
SSBP4-209ENST00000601357 BICD2Q8TD16 824 aa25.77■■□□□ 1.72
SSBP4-209ENST00000601357 PPM1EQ8WY54 764 aa25.77■■□□□ 1.72
SSBP4-209ENST00000601357 ARNTL2Q8WYA1 636 aa25.77■■□□□ 1.72
SSBP4-209ENST00000601357 PRDM6Q9NQX0 595 aa25.77■■□□□ 1.72
SSBP4-209ENST00000601357 VPS54Q9P1Q0 977 aa25.77■■□□□ 1.72
SSBP4-209ENST00000601357 IPO5O00410 1097 aaKnown RBP25.76■■□□□ 1.71
SSBP4-209ENST00000601357 CIITAP33076 1130 aa25.76■■□□□ 1.71
SSBP4-209ENST00000601357 SLC26A2P50443 739 aa25.76■■□□□ 1.71
SSBP4-209ENST00000601357 HTRA4P83105 476 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-209ENST00000601357 SETQ01105 290 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-209ENST00000601357 RASGRP4Q8TDF6 673 aa25.76■■□□□ 1.71
SSBP4-209ENST00000601357 APBB2Q92870 758 aa25.76■■□□□ 1.71
SSBP4-209ENST00000601357 TNPO1Q92973 898 aaKnown RBP25.76■■□□□ 1.71
SSBP4-209ENST00000601357 IFIH1Q9BYX4 1025 aaKnown RBP25.76■■□□□ 1.71
SSBP4-209ENST00000601357 MTCH2Q9Y6C9 303 aa25.76■■□□□ 1.71
SSBP4-209ENST00000601357 COL4A6Q14031 1691 aa25.75■■□□□ 1.71
SSBP4-209ENST00000601357 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-209ENST00000601357 EDIL3O43854 480 aa25.75■■□□□ 1.71
SSBP4-209ENST00000601357 IGBP1P78318 339 aa25.75■■□□□ 1.71
SSBP4-209ENST00000601357 CCDC85BQ15834 202 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-209ENST00000601357 RSPH3Q86UC2 560 aa25.75■■□□□ 1.71
SSBP4-209ENST00000601357 DNAJB3Q8WWF6 145 aa25.75■■□□□ 1.71
SSBP4-209ENST00000601357 ZBTB10Q96DT7 871 aa25.75■■□□□ 1.71
SSBP4-209ENST00000601357 LARP6Q9BRS8 491 aaKnown RBP25.75■■□□□ 1.71
SSBP4-209ENST00000601357 TRPC6Q9Y210 931 aa25.75■■□□□ 1.71
SSBP4-209ENST00000601357 INSL6Q9Y581 213 aa25.75■■□□□ 1.71
SSBP4-209ENST00000601357 CUL9Q8IWT3 2517 aa25.75■■□□□ 1.71
SSBP4-209ENST00000601357 LINC01553A4QN01 128 aa25.74■■□□□ 1.71
SSBP4-209ENST00000601357 DDX39AO00148 427 aaKnown RBP25.74■■□□□ 1.71
SSBP4-209ENST00000601357 RPLP2P05387 115 aaKnown RBP25.74■■□□□ 1.71
SSBP4-209ENST00000601357 LPIN1Q14693 890 aa25.74■■□□□ 1.71
SSBP4-209ENST00000601357 FAM117BQ6P1L5 589 aa25.74■■□□□ 1.71
SSBP4-209ENST00000601357 TRIM22Q8IYM9 498 aa25.74■■□□□ 1.71
SSBP4-209ENST00000601357 MYOCDQ8IZQ8 938 aa25.74■■□□□ 1.71
SSBP4-209ENST00000601357 TOP1MTQ969P6 601 aa25.74■■□□□ 1.71
SSBP4-209ENST00000601357 LENG9Q96B70 501 aa25.74■■□□□ 1.71
SSBP4-209ENST00000601357 ZNF577Q9BSK1 485 aa25.74■■□□□ 1.71
SSBP4-209ENST00000601357 PDRG1Q9NUG6 133 aa25.74■■□□□ 1.71
SSBP4-209ENST00000601357 POTEB3A0JP26 581 aa25.73■■□□□ 1.71
SSBP4-209ENST00000601357 LPXNO60711 386 aa25.73■■□□□ 1.71
SSBP4-209ENST00000601357 ERVK-21P61565 698 aa25.73■■□□□ 1.71
SSBP4-209ENST00000601357 SSRP1Q08945 709 aaKnown RBP25.73■■□□□ 1.71
SSBP4-209ENST00000601357 POTEBQ6S5H4 581 aa25.73■■□□□ 1.71
SSBP4-209ENST00000601357 CCDC60Q8IWA6 550 aaPredicted RBP25.73■■□□□ 1.71
SSBP4-209ENST00000601357 SP7Q8TDD2 431 aaPredicted RBP25.73■■□□□ 1.71
SSBP4-209ENST00000601357 TRAPPC12Q8WVT3 735 aa25.73■■□□□ 1.71
SSBP4-209ENST00000601357 TBC1D22BQ9NU19 505 aa25.73■■□□□ 1.71
SSBP4-209ENST00000601357 PCDHA2Q9Y5H9 948 aa25.73■■□□□ 1.71
SSBP4-209ENST00000601357 DEXIO95424 95 aa25.72■■□□□ 1.71
SSBP4-209ENST00000601357 GHRP10912 638 aa25.72■■□□□ 1.71
SSBP4-209ENST00000601357 MRPS6P82932 125 aaKnown RBP25.72■■□□□ 1.71
SSBP4-209ENST00000601357 GRB10Q13322 594 aa25.72■■□□□ 1.71
SSBP4-209ENST00000601357 PRR16Q569H4 304 aa25.72■■□□□ 1.71
SSBP4-209ENST00000601357 FBXO47Q5MNV8 452 aa25.72■■□□□ 1.71
SSBP4-209ENST00000601357 CDY2AQ9Y6F7 541 aa25.72■■□□□ 1.71
SSBP4-209ENST00000601357 MUC3AQ02505 3323 aa25.71■■□□□ 1.71
SSBP4-209ENST00000601357 CPLX1O14810 134 aa25.71■■□□□ 1.71
SSBP4-209ENST00000601357 FAM160B1Q5W0V3 765 aa25.71■■□□□ 1.71
SSBP4-209ENST00000601357 ZNF746Q6NUN9 644 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms