RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 COL19A1Q14993 1142 aa20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 ADCK5Q3MIX3 580 aa20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 TEX2Q8IWB9 1127 aa20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 IL17RAQ96F46 866 aa20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 TCEANC2Q96MN5 208 aa20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 AGO3Q9H9G7 860 aaKnown RBP20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 JPH1Q9HDC5 661 aaPredicted RBP20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 BRWD1Q9NSI6 2320 aa20.6■□□□□ 0.89
CHMP2A-208ENST00000601220 NFASCO94856 1347 aa20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 ITGB3BPQ13352 177 aaPredicted RBP20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 PTPROQ16827 1216 aa20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 DHX32Q7L7V1 743 aaKnown RBP20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 CRIPAKQ8N1N5 446 aa20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 NEK9Q8TD19 979 aa20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 ZNF689Q96CS4 500 aaPredicted RBP20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 PGBD1Q96JS3 809 aa20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 RBM28Q9NW13 759 aaKnown RBP20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 SLC9A2Q9UBY0 812 aa20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 CDY2AQ9Y6F7 541 aa20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 V9GY48 417 aaPredicted RBP20.59■□□□□ 0.89
CHMP2A-208ENST00000601220 RRN3P2A6NIE6 340 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 C5orf67F2Z3F1 127 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 STXBP3O00186 592 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 ATG7O95352 703 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 KCNA5P22460 613 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 CLK2P49760 499 aaKnown RBP20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 MRPS6P82932 125 aaKnown RBP20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 PLCB4Q15147 1175 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 PPP1R18Q6NYC8 613 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 SYNE3Q6ZMZ3 975 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 RSPH3Q86UC2 560 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 RTN4RL1Q86UN2 441 aaPredicted RBP20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 BANK1Q8NDB2 785 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 LINC01599Q8WXQ3 324 aa20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 AGO4Q9HCK5 861 aaKnown RBP20.58■□□□□ 0.89
CHMP2A-208ENST00000601220 MEIS1O00470 390 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 CDC27P30260 824 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 BMPR1AP36894 532 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 NAPAP54920 295 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 ACTR2P61160 394 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 IGBP1P78318 339 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 TIGD5Q53EQ6 642 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 CEP55Q53EZ4 464 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 TCEAL5Q5H9L2 206 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 RNF20Q5VTR2 975 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 TSHZ1Q6ZSZ6 1077 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 PLPPR4Q7Z2D5 763 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 FAM178BQ8IXR5 827 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 FIBCD1Q8N539 461 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 CLP1Q92989 425 aaKnown RBP20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 C11orf16Q9NQ32 467 aa20.57■□□□□ 0.88
CHMP2A-208ENST00000601220 IGKV6D-21A0A0A0MT36 114 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 GRXCR2A6NFK2 248 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 ZBTB43O43298 467 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 FOSP01100 380 aaPredicted RBP20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 RB1P06400 928 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 RTN1Q16799 776 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 TRAPPC12Q8WVT3 735 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 CRYGNQ8WXF5 182 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 LRFN3Q9BTN0 628 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 ANO3Q9BYT9 981 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 TMEM260Q9NX78 707 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 BARHL2Q9NY43 387 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 PCDHA2Q9Y5H9 948 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 SQORQ9Y6N5 450 aa20.56■□□□□ 0.88
CHMP2A-208ENST00000601220 SMCO2A6NFE2 343 aa20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 PI4K2BG5E9Z4 385 aa20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 DGKIO75912 1065 aa20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 IL9P15248 144 aa20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 CD52P31358 61 aa20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 SREBF1P36956 1147 aa20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 STAT5BP51692 787 aa20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 ADCY7P51828 1080 aa20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 FAM49AQ9H0Q0 323 aaPredicted RBP20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 NSUN3Q9H649 340 aaKnown RBP20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 AZI2Q9H6S1 392 aa20.55■□□□□ 0.88
CHMP2A-208ENST00000601220 ADGRA3Q8IWK6 1321 aa20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 hCG_1984214I3L0E3 225 aa20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 ADAMTS3O15072 1205 aa20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 GRM6O15303 877 aa20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 CCNE2O96020 404 aa20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 RPLP2P05387 115 aaKnown RBP20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 PTCRAQ6ISU1 281 aaPredicted RBP20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 ABHD15Q6UXT9 468 aa20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 ZNF713Q8N859 430 aaPredicted RBP20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 KCNB2Q92953 911 aa20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 PABPC5Q96DU9 382 aaKnown RBP20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 SDF4Q9BRK5 362 aa20.54■□□□□ 0.88
CHMP2A-208ENST00000601220 KLF18A0A0U1RQI7 1052 aa20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 POTEB3A0JP26 581 aa20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 H3BQ06 376 aaPredicted RBP20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 DHX15O43143 795 aaKnown RBP20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 GPR37L1O60883 481 aa20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 CTNNB1P35222 781 aa20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 LTBRP36941 435 aa20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 RCAN1P53805 252 aa20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 TMEM62Q0P6H9 643 aa20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 AP3B2Q13367 1082 aa20.53■□□□□ 0.88
CHMP2A-208ENST00000601220 IER5Q5VY09 327 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms