RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 PCYT2Q99447 389 aa13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 RAD9AQ99638 391 aa13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 SLC26A6Q9BXS9 759 aa13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 ZMYND12Q9H0C1 365 aa13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 AZI2Q9H6S1 392 aa13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 NCOA5Q9HCD5 579 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 ZSWIM6Q9HCJ5 1215 aa13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 NID2Q14112 1375 aa13.2□□□□□ -0.3
SOX2-OT-233ENST00000600778 DDX39AO00148 427 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 MEIS1O00470 390 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 AMHP03971 560 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 ACTR2P61160 394 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 TOB2Q14106 344 aaPredicted RBP13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 NTRK3Q16288 839 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 FAM26DQ5JW98 314 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 PLA2G4DQ86XP0 818 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 SEPT8Q92599 483 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 UIMC1Q96RL1 719 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 TUBE1Q9UJT0 475 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
SOX2-OT-233ENST00000600778 ESYT2A0FGR8 921 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 FAM86B1E9PN63 330 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 CHRNA1P02708 482 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 FAM86B2P0C5J1 330 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 INSRRP14616 1297 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 IFNAR1P17181 557 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 GNA11P29992 359 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 KRT40Q6A162 431 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 MCTP2Q6DN12 878 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 TAF2Q6P1X5 1199 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 NIPA1Q7RTP0 329 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 RSPH3Q86UC2 560 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 REXO1Q8N1G1 1221 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 DNAJB3Q8WWF6 145 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 ZBTB10Q96DT7 871 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 TRPC6Q9Y210 931 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 MTCH2Q9Y6C9 303 aa13.18□□□□□ -0.3
SOX2-OT-233ENST00000600778 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 MBLAC1A4D2B0 266 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 RRN3P2A6NIE6 340 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 UPP2O95045 317 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 ATG7O95352 703 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 CYP3A4P08684 503 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 GHRP10912 638 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 STAT5BP51692 787 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 EVCP57679 992 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 MGAT3Q09327 533 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 PLCB4Q15147 1175 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 PLPPR4Q7Z2D5 763 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 RPAINQ86UA6 219 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 RASGRP4Q8TDF6 673 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 TNPO1Q92973 898 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 VPS54Q9P1Q0 977 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 THEGQ9P2T0 379 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 MTUS1Q9ULD2 1270 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 INSL6Q9Y581 213 aa13.17□□□□□ -0.3
SOX2-OT-233ENST00000600778 IGLV3-22A0A075B6J6 115 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 LINC01553A4QN01 128 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 BACH1O14867 736 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 SEC24BO95487 1268 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 CCNE2O96020 404 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 POU3F3P20264 500 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 NLRP5P59047 1200 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 SSRP1Q08945 709 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 STK3Q13188 491 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 GRB10Q13322 594 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 TJAP1Q5JTD0 557 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 ABHD15Q6UXT9 468 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 CCDC148Q8NFR7 591 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 BICD2Q8TD16 824 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 TRAPPC12Q8WVT3 735 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 CRYGNQ8WXF5 182 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 APBB2Q92870 758 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 TOP1MTQ969P6 601 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 ZNF274Q96GC6 653 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 TGS1Q96RS0 853 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 ZNF577Q9BSK1 485 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 TM6SF1Q9BZW5 370 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 FAM49AQ9H0Q0 323 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 TSPYL2Q9H2G4 693 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 CDY2AQ9Y6F7 541 aa13.16□□□□□ -0.3
SOX2-OT-233ENST00000600778 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
SOX2-OT-233ENST00000600778 IGKV6D-21A0A0A0MT36 114 aa13.15□□□□□ -0.3
SOX2-OT-233ENST00000600778 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
SOX2-OT-233ENST00000600778 IPO5O00410 1097 aaKnown RBP13.15□□□□□ -0.3
SOX2-OT-233ENST00000600778 DHX15O43143 795 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms