RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ABHD15	Q6UXT9	468 aa		24.69	■■□□□ 1.54
LTBP4-227	ENST00000600026	VTI1A	Q96AJ9	217 aa		24.69	■■□□□ 1.54
LTBP4-227	ENST00000600026	PCYT2	Q99447	389 aa		24.69	■■□□□ 1.54
LTBP4-227	ENST00000600026	KATNAL1	Q9BW62	490 aa		24.69	■■□□□ 1.54
LTBP4-227	ENST00000600026	SRPRB	Q9Y5M8	271 aa	Known RBP	24.69	■■□□□ 1.54
LTBP4-227	ENST00000600026		A0A0U1RQG5	324 aa	Predicted RBP	24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	LGR5	O75473	907 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	PSEN2	P49810	448 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	JAK3	P52333	1124 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	MIS18BP1	Q6P0N0	1132 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	SLC39A5	Q6ZMH5	540 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	MIER3	Q7Z3K6	550 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	TMEM87A	Q8NBN3	555 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	RAB34	Q9BZG1	259 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	TTC12	Q9H892	705 aa	Predicted RBP	24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	DISC1	Q9NRI5	854 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	PCDHA12	Q9UN75	941 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	SAMM50	Q9Y512	469 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	PCDHA10	Q9Y5I2	948 aa		24.68	■■□□□ 1.54
LTBP4-227	ENST00000600026	GRIN2D	O15399	1336 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	IGKV6D-21	A0A0A0MT36	114 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	VWA3A	A6NCI4	1184 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	GOLGA6L4	A6NEF3	574 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	HAS3	O00219	553 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	CUTA	O60888	179 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	SFN	P31947	248 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	SPIRE1	Q08AE8	756 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	MFSD10	Q14728	455 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	SNX17	Q15036	470 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	CCDC60	Q8IWA6	550 aa	Predicted RBP	24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	RDM1	Q8NG50	284 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	FBXO2	Q9UK22	296 aa	Predicted RBP	24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026	PCDHA7	Q9UN72	937 aa		24.67	■■□□□ 1.54
LTBP4-227	ENST00000600026		H3BRB1	525 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	EML1	O00423	815 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	BACH1	O14867	736 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	PSAP	P07602	524 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	FXR2	P51116	673 aa	Known RBP eCLIP	24.66	■■□□□ 1.54	2e-9	■■■■■ 41.3
LTBP4-227	ENST00000600026	CHMP4BP1	P59074	171 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	ITGA7	Q13683	1181 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	NCAPH2	Q6IBW4	605 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	PPP1R13L	Q8WUF5	828 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	GLG1	Q92896	1179 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	SMARCAD1	Q9H4L7	1026 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	TUT1	Q9H6E5	874 aa	Known RBP	24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	AZI2	Q9H6S1	392 aa		24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	ZNF215	Q9UL58	517 aa	Predicted RBP	24.66	■■□□□ 1.54
LTBP4-227	ENST00000600026	LONP1	P36776	959 aa	Known RBP	24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	TEC	P42680	631 aa		24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	LRRC26	Q2I0M4	334 aa		24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	KIAA0753	Q2KHM9	967 aa		24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	NBPF20	Q3BBV1	942 aa		24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	FAM160B1	Q5W0V3	765 aa		24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	SWSAP1	Q6NVH7	229 aa		24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	SLC43A3	Q8NBI5	491 aa		24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	AFAP1L1	Q8TED9	768 aa		24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	ZNF302	Q9NR11	478 aa		24.65	■■□□□ 1.54
LTBP4-227	ENST00000600026	IGSF9B	Q9UPX0	1349 aa		24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	ARVCF	O00192	962 aa		24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	PRPF40A	O75400	957 aa	Known RBP	24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	MARK3	P27448	753 aa		24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	STAT5B	P51692	787 aa		24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	PDIA5	Q14554	519 aa		24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	C1orf53	Q5VUE5	145 aa		24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	PLPPR4	Q7Z2D5	763 aa		24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	ZNF579	Q8NAF0	562 aa	Known RBP	24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	ERAP1	Q9NZ08	941 aa		24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	GABBR1	Q9UBS5	961 aa		24.64	■■□□□ 1.54
LTBP4-227	ENST00000600026	MKI67	P46013	3256 aa	Known RBP	24.64	■■□□□ 1.53
LTBP4-227	ENST00000600026	KAT6A	Q92794	2004 aa		24.63	■■□□□ 1.53
LTBP4-227	ENST00000600026	POTEM	A6NI47	508 aa		24.63	■■□□□ 1.53
LTBP4-227	ENST00000600026	RTP1	P59025	263 aa		24.63	■■□□□ 1.53
LTBP4-227	ENST00000600026	IL17A	Q16552	155 aa		24.63	■■□□□ 1.53
LTBP4-227	ENST00000600026	ADAL	Q6DHV7	355 aa		24.63	■■□□□ 1.53
LTBP4-227	ENST00000600026	AK8	Q96MA6	479 aa		24.63	■■□□□ 1.53
LTBP4-227	ENST00000600026	CLIC6	Q96NY7	704 aa		24.63	■■□□□ 1.53
LTBP4-227	ENST00000600026	CSRNP2	Q9H175	543 aa		24.63	■■□□□ 1.53
LTBP4-227	ENST00000600026	LRWD1	Q9UFC0	647 aa		24.63	■■□□□ 1.53
LTBP4-227	ENST00000600026	MCM4	P33991	863 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	CDK7	P50613	346 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	EPHA7	Q15375	998 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	UGCG	Q16739	394 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	TRIM60	Q495X7	471 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	FAM47C	Q5HY64	1035 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	AXDND1	Q5T1B0	1012 aa	Predicted RBP	24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	PDXDC2P	Q6P474	469 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	NFRKB	Q6P4R8	1299 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	HTATIP2	Q9BUP3	242 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	SEZ6L	Q9BYH1	1024 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	MAFB	Q9Y5Q3	323 aa	Predicted RBP	24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	STK24	Q9Y6E0	443 aa		24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	TRIP12	Q14669	1992 aa	Predicted RBP	24.62	■■□□□ 1.53
LTBP4-227	ENST00000600026	DDX11L8	A8MPP1	907 aa		24.61	■■□□□ 1.53
LTBP4-227	ENST00000600026	SLC26A2	P50443	739 aa		24.61	■■□□□ 1.53
LTBP4-227	ENST00000600026	PLCB4	Q15147	1175 aa		24.61	■■□□□ 1.53
LTBP4-227	ENST00000600026	SESTD1	Q86VW0	696 aa		24.61	■■□□□ 1.53
LTBP4-227	ENST00000600026	IGSF22	Q8N9C0	903 aa		24.61	■■□□□ 1.53
LTBP4-227	ENST00000600026	RNPEP	Q9H4A4	650 aa		24.61	■■□□□ 1.53
LTBP4-227	ENST00000600026	HDAC6	Q9UBN7	1215 aa		24.61	■■□□□ 1.53
LTBP4-227	ENST00000600026	ATP11B	Q9Y2G3	1177 aa		24.61	■■□□□ 1.53

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