RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 LRCH2Q5VUJ6 765 aa31.9■■■□□ 2.7
SSBP4-206ENST00000599699 MOXD1Q6UVY6 613 aa31.9■■■□□ 2.7
SSBP4-206ENST00000599699 PLPPR4Q7Z2D5 763 aa31.9■■■□□ 2.7
SSBP4-206ENST00000599699 DIS3L2Q8IYB7 885 aaKnown RBP31.9■■■□□ 2.7
SSBP4-206ENST00000599699 LMBR1Q8WVP7 490 aa31.9■■■□□ 2.7
SSBP4-206ENST00000599699 RFC2P35250 354 aa31.89■■■□□ 2.7
SSBP4-206ENST00000599699 SAFBQ15424 915 aaKnown RBP eCLIP31.89■■■□□ 2.7
SSBP4-206ENST00000599699 LRRC8DQ7L1W4 858 aa31.89■■■□□ 2.7
SSBP4-206ENST00000599699 SLC5A5Q92911 643 aa31.89■■■□□ 2.7
SSBP4-206ENST00000599699 TNPO1Q92973 898 aaKnown RBP31.89■■■□□ 2.7
SSBP4-206ENST00000599699 WNT8BQ93098 351 aa31.89■■■□□ 2.7
SSBP4-206ENST00000599699 RIT2Q99578 217 aa31.89■■■□□ 2.7
SSBP4-206ENST00000599699 TEKT3Q9BXF9 490 aa31.89■■■□□ 2.7
SSBP4-206ENST00000599699 BTBD18B2RXH4 712 aa31.88■■■□□ 2.69
SSBP4-206ENST00000599699 CCNT1O60563 726 aaKnown RBP31.88■■■□□ 2.69
SSBP4-206ENST00000599699 THPOP40225 353 aa31.88■■■□□ 2.69
SSBP4-206ENST00000599699 MCM2P49736 904 aa31.88■■■□□ 2.69
SSBP4-206ENST00000599699 IGBP1P78318 339 aa31.88■■■□□ 2.69
SSBP4-206ENST00000599699 GRIK4Q16099 956 aa31.88■■■□□ 2.69
SSBP4-206ENST00000599699 EARS2Q5JPH6 523 aaKnown RBP31.88■■■□□ 2.69
SSBP4-206ENST00000599699 SWSAP1Q6NVH7 229 aa31.88■■■□□ 2.69
SSBP4-206ENST00000599699 SMAP1Q8IYB5 467 aaPredicted RBP31.88■■■□□ 2.69
SSBP4-206ENST00000599699 GJA10Q969M2 543 aa31.88■■■□□ 2.69
SSBP4-206ENST00000599699 NAP1L4Q99733 375 aaKnown RBP31.88■■■□□ 2.69
SSBP4-206ENST00000599699 FTOQ9C0B1 505 aaKnown RBP eCLIP31.88■■■□□ 2.69
SSBP4-206ENST00000599699 ZNF302Q9NR11 478 aa31.88■■■□□ 2.69
SSBP4-206ENST00000599699 FAM205CA6NFA0 338 aa31.87■■■□□ 2.69
SSBP4-206ENST00000599699 CD2BP2O95400 341 aaKnown RBP31.87■■■□□ 2.69
SSBP4-206ENST00000599699 PSAPP07602 524 aa31.87■■■□□ 2.69
SSBP4-206ENST00000599699 RBL2Q08999 1139 aa31.87■■■□□ 2.69
SSBP4-206ENST00000599699 PLCB4Q15147 1175 aa31.87■■■□□ 2.69
SSBP4-206ENST00000599699 TRIM71Q2Q1W2 868 aaKnown RBP31.87■■■□□ 2.69
SSBP4-206ENST00000599699 PDXDC2PQ6P474 469 aa31.87■■■□□ 2.69
SSBP4-206ENST00000599699 OTOP2Q7RTS6 562 aa31.87■■■□□ 2.69
SSBP4-206ENST00000599699 CCDC60Q8IWA6 550 aaPredicted RBP31.87■■■□□ 2.69
SSBP4-206ENST00000599699 TMX3Q96JJ7 454 aa31.87■■■□□ 2.69
SSBP4-206ENST00000599699 MBOAT7Q96N66 472 aa31.87■■■□□ 2.69
SSBP4-206ENST00000599699 MTIF3Q9H2K0 278 aaKnown RBP31.87■■■□□ 2.69
SSBP4-206ENST00000599699 PCDHA10Q9Y5I2 948 aa31.87■■■□□ 2.69
SSBP4-206ENST00000599699 LAMA3Q16787 3333 aa31.86■■■□□ 2.69
SSBP4-206ENST00000599699 IGKV6D-21A0A0A0MT36 114 aa31.86■■■□□ 2.69
SSBP4-206ENST00000599699 CHMP2AO43633 222 aa31.86■■■□□ 2.69
SSBP4-206ENST00000599699 PFKMP08237 780 aa31.86■■■□□ 2.69
SSBP4-206ENST00000599699 GCFC2P16383 781 aaKnown RBP31.86■■■□□ 2.69
SSBP4-206ENST00000599699 SLC26A2P50443 739 aa31.86■■■□□ 2.69
SSBP4-206ENST00000599699 TNFRSF25Q93038 417 aa31.86■■■□□ 2.69
SSBP4-206ENST00000599699 POTEB3A0JP26 581 aa31.85■■■□□ 2.69
SSBP4-206ENST00000599699 WDR64B1ANS9 1081 aa31.85■■■□□ 2.69
SSBP4-206ENST00000599699 SLC37A4O43826 429 aa31.85■■■□□ 2.69
SSBP4-206ENST00000599699 INSRRP14616 1297 aa31.85■■■□□ 2.69
SSBP4-206ENST00000599699 ZNF618Q5T7W0 954 aa31.85■■■□□ 2.69
SSBP4-206ENST00000599699 PPP4R3AQ6IN85 833 aa31.85■■■□□ 2.69
SSBP4-206ENST00000599699 POTEBQ6S5H4 581 aa31.85■■■□□ 2.69
SSBP4-206ENST00000599699 CKAP2LQ8IYA6 745 aa31.85■■■□□ 2.69
SSBP4-206ENST00000599699 RRN3P2A6NIE6 340 aa31.84■■■□□ 2.69
SSBP4-206ENST00000599699 MARCH6O60337 910 aa31.84■■■□□ 2.69
SSBP4-206ENST00000599699 ADAM17P78536 824 aa31.84■■■□□ 2.69
SSBP4-206ENST00000599699 HERVK_113Q902F9 699 aa31.84■■■□□ 2.69
SSBP4-206ENST00000599699 DISC1Q9NRI5 854 aa31.84■■■□□ 2.69
SSBP4-206ENST00000599699 TUBE1Q9UJT0 475 aa31.84■■■□□ 2.69
SSBP4-206ENST00000599699 TRIP12Q14669 1992 aaPredicted RBP31.83■■■□□ 2.69
SSBP4-206ENST00000599699 PSMD10O75832 226 aa31.83■■■□□ 2.69
SSBP4-206ENST00000599699 PARNO95453 639 aaKnown RBP31.83■■■□□ 2.69
SSBP4-206ENST00000599699 ETNPPLQ8TBG4 499 aa31.83■■■□□ 2.69
SSBP4-206ENST00000599699 UNC45AQ9H3U1 944 aa31.83■■■□□ 2.69
SSBP4-206ENST00000599699 GABBR1Q9UBS5 961 aa31.83■■■□□ 2.69
SSBP4-206ENST00000599699 ZBBXA8MT70 800 aa31.82■■■□□ 2.68
SSBP4-206ENST00000599699 RSPH10B2B2RC85 870 aa31.82■■■□□ 2.68
SSBP4-206ENST00000599699 RSPH10BP0C881 870 aa31.82■■■□□ 2.68
SSBP4-206ENST00000599699 ACTN1P12814 892 aa31.82■■■□□ 2.68
SSBP4-206ENST00000599699 SFNP31947 248 aa31.82■■■□□ 2.68
SSBP4-206ENST00000599699 JAK3P52333 1124 aa31.82■■■□□ 2.68
SSBP4-206ENST00000599699 GNL2Q13823 731 aaKnown RBP31.82■■■□□ 2.68
SSBP4-206ENST00000599699 VWCEQ96DN2 955 aa31.82■■■□□ 2.68
SSBP4-206ENST00000599699 CTSHP09668 335 aa31.81■■■□□ 2.68
SSBP4-206ENST00000599699 TAF2Q6P1X5 1199 aa31.81■■■□□ 2.68
SSBP4-206ENST00000599699 RUFY4Q6ZNE9 571 aa31.81■■■□□ 2.68
SSBP4-206ENST00000599699 TRMT1LQ7Z2T5 733 aaKnown RBP31.81■■■□□ 2.68
SSBP4-206ENST00000599699 MIER3Q7Z3K6 550 aa31.81■■■□□ 2.68
SSBP4-206ENST00000599699 FBXO18Q8NFZ0 1043 aa31.81■■■□□ 2.68
SSBP4-206ENST00000599699 ATP8B4Q8TF62 1192 aa31.81■■■□□ 2.68
SSBP4-206ENST00000599699 KIF3AQ9Y496 699 aa31.81■■■□□ 2.68
SSBP4-206ENST00000599699 HBP1O60381 514 aa31.8■■■□□ 2.68
SSBP4-206ENST00000599699 CAND2O75155 1236 aa31.8■■■□□ 2.68
SSBP4-206ENST00000599699 MARCH8Q5T0T0 291 aa31.8■■■□□ 2.68
SSBP4-206ENST00000599699 TRAPPC12Q8WVT3 735 aa31.8■■■□□ 2.68
SSBP4-206ENST00000599699 FAM20AQ96MK3 541 aa31.8■■■□□ 2.68
SSBP4-206ENST00000599699 CXXC1Q9P0U4 656 aaPredicted RBP31.8■■■□□ 2.68
SSBP4-206ENST00000599699 MAFBQ9Y5Q3 323 aaPredicted RBP31.8■■■□□ 2.68
SSBP4-206ENST00000599699 RASIP1Q5U651 963 aa31.79■■■□□ 2.68
SSBP4-206ENST00000599699 TRAF7Q6Q0C0 670 aa31.79■■■□□ 2.68
SSBP4-206ENST00000599699 RSPH3Q86UC2 560 aa31.79■■■□□ 2.68
SSBP4-206ENST00000599699 POTEDQ86YR6 584 aa31.79■■■□□ 2.68
SSBP4-206ENST00000599699 ZBTB10Q96DT7 871 aa31.79■■■□□ 2.68
SSBP4-206ENST00000599699 TANC1Q9C0D5 1861 aa31.79■■■□□ 2.68
SSBP4-206ENST00000599699 SCN5AQ14524 2016 aa31.78■■■□□ 2.68
SSBP4-206ENST00000599699 KAT6AQ92794 2004 aa31.78■■■□□ 2.68
SSBP4-206ENST00000599699 HSFX4A0A1B0GTS1 333 aaPredicted RBP31.78■■■□□ 2.68
SSBP4-206ENST00000599699 HSFX3A0A1B0GWH4 333 aaPredicted RBP31.78■■■□□ 2.68
SSBP4-206ENST00000599699 MBLAC1A4D2B0 266 aaPredicted RBP31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms