RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 APOA5Q6Q788 366 aa16.82■□□□□ 0.28
IRF3-223ENST00000599223 TMTC2Q8N394 836 aa16.82■□□□□ 0.28
IRF3-223ENST00000599223 DNAJB3Q8WWF6 145 aa16.82■□□□□ 0.28
IRF3-223ENST00000599223 SEPT1Q8WYJ6 367 aa16.82■□□□□ 0.28
IRF3-223ENST00000599223 GLG1Q92896 1179 aa16.82■□□□□ 0.28
IRF3-223ENST00000599223 CDHR1Q96JP9 859 aa16.82■□□□□ 0.28
IRF3-223ENST00000599223 C1QTNF1Q9BXJ1 281 aa16.82■□□□□ 0.28
IRF3-223ENST00000599223 AGO3Q9H9G7 860 aaKnown RBP16.82■□□□□ 0.28
IRF3-223ENST00000599223 JPH1Q9HDC5 661 aaPredicted RBP16.82■□□□□ 0.28
IRF3-223ENST00000599223 BRPF3Q9ULD4 1205 aa16.82■□□□□ 0.28
IRF3-223ENST00000599223 CDY2AQ9Y6F7 541 aa16.82■□□□□ 0.28
IRF3-223ENST00000599223 FAM86C2PA6NEL3 165 aa16.81■□□□□ 0.28
IRF3-223ENST00000599223 H3BQ06 376 aaPredicted RBP16.81■□□□□ 0.28
IRF3-223ENST00000599223 TIGD5Q53EQ6 642 aa16.81■□□□□ 0.28
IRF3-223ENST00000599223 TCEAL5Q5H9L2 206 aa16.81■□□□□ 0.28
IRF3-223ENST00000599223 FBXO47Q5MNV8 452 aa16.81■□□□□ 0.28
IRF3-223ENST00000599223 BANK1Q8NDB2 785 aa16.81■□□□□ 0.28
IRF3-223ENST00000599223 TRAPPC12Q8WVT3 735 aa16.81■□□□□ 0.28
IRF3-223ENST00000599223 SAMD11Q96NU1 681 aa16.81■□□□□ 0.28
IRF3-223ENST00000599223 LRFN3Q9BTN0 628 aa16.81■□□□□ 0.28
IRF3-223ENST00000599223 FAM49AQ9H0Q0 323 aaPredicted RBP16.81■□□□□ 0.28
IRF3-223ENST00000599223 KCNH7Q9NS40 1196 aa16.81■□□□□ 0.28
IRF3-223ENST00000599223 CTNNB1P35222 781 aa16.8■□□□□ 0.28
IRF3-223ENST00000599223 ITGB3BPQ13352 177 aaPredicted RBP16.8■□□□□ 0.28
IRF3-223ENST00000599223 COL19A1Q14993 1142 aa16.8■□□□□ 0.28
IRF3-223ENST00000599223 ADCK5Q3MIX3 580 aa16.8■□□□□ 0.28
IRF3-223ENST00000599223 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
IRF3-223ENST00000599223 NEK9Q8TD19 979 aa16.8■□□□□ 0.28
IRF3-223ENST00000599223 SMARCAD1Q9H4L7 1026 aa16.8■□□□□ 0.28
IRF3-223ENST00000599223 WDR81Q562E7 1941 aa16.8■□□□□ 0.28
IRF3-223ENST00000599223 STXBP3O00186 592 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 ARP10275 920 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 INSRRP14616 1297 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 NAPAP54920 295 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 ACTR2P61160 394 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 MRPS6P82932 125 aaKnown RBP16.79■□□□□ 0.28
IRF3-223ENST00000599223 TMEM62Q0P6H9 643 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 PTPROQ16827 1216 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 PTCRAQ6ISU1 281 aaPredicted RBP16.79■□□□□ 0.28
IRF3-223ENST00000599223 TSHZ1Q6ZSZ6 1077 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 FAM178BQ8IXR5 827 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 IL17RAQ96F46 866 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 MXRA8Q9BRK3 442 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 ANO3Q9BYT9 981 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 RIC8AQ9NPQ8 531 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 FAM217BQ9NTX9 383 aaPredicted RBP16.79■□□□□ 0.28
IRF3-223ENST00000599223 TMEM260Q9NX78 707 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 SLC9A2Q9UBY0 812 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 PLXNA4Q9HCM2 1894 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 EVPLQ92817 2033 aa16.79■□□□□ 0.28
IRF3-223ENST00000599223 C5orf67F2Z3F1 127 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 ENPP3O14638 875 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 ADAMTS3O15072 1205 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 GRM6O15303 877 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 CSPG5O95196 566 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 CD52P31358 61 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 PLA2G5P39877 138 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 EXOSC10Q01780 885 aaKnown RBP16.78■□□□□ 0.28
IRF3-223ENST00000599223 PLCB4Q15147 1175 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 RTN1Q16799 776 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 BMP2KLQ5H9B9 411 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 FIBCD1Q8N539 461 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 NSUN3Q9H649 340 aaKnown RBP16.78■□□□□ 0.28
IRF3-223ENST00000599223 AGO4Q9HCK5 861 aaKnown RBP16.78■□□□□ 0.28
IRF3-223ENST00000599223 TRPC6Q9Y210 931 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 TRIOO75962 3097 aa16.78■□□□□ 0.28
IRF3-223ENST00000599223 FNDC1Q4ZHG4 1894 aaPredicted RBP16.78■□□□□ 0.28
IRF3-223ENST00000599223 NFASCO94856 1347 aa16.77■□□□□ 0.28
IRF3-223ENST00000599223 GRXCR2A6NFK2 248 aa16.77■□□□□ 0.28
IRF3-223ENST00000599223 CCNE2O96020 404 aa16.77■□□□□ 0.28
IRF3-223ENST00000599223 CDC27P30260 824 aa16.77■□□□□ 0.28
IRF3-223ENST00000599223 ADCY7P51828 1080 aa16.77■□□□□ 0.28
IRF3-223ENST00000599223 PPP1R18Q6NYC8 613 aa16.77■□□□□ 0.28
IRF3-223ENST00000599223 RSPH3Q86UC2 560 aa16.77■□□□□ 0.28
IRF3-223ENST00000599223 RTN4RL1Q86UN2 441 aaPredicted RBP16.77■□□□□ 0.28
IRF3-223ENST00000599223 CRIPAKQ8N1N5 446 aa16.77■□□□□ 0.28
IRF3-223ENST00000599223 CLP1Q92989 425 aaKnown RBP16.77■□□□□ 0.28
IRF3-223ENST00000599223 ZNF689Q96CS4 500 aaPredicted RBP16.77■□□□□ 0.28
IRF3-223ENST00000599223 PABPC5Q96DU9 382 aaKnown RBP16.77■□□□□ 0.28
IRF3-223ENST00000599223 NEK1Q96PY6 1258 aa16.77■□□□□ 0.28
IRF3-223ENST00000599223 MAFGO15525 162 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 ZBTB43O43298 467 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 DGKIO75912 1065 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 BMPR1AP36894 532 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 LTBRP36941 435 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 SREBF1P36956 1147 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 CLK2P49760 499 aaKnown RBP16.76■□□□□ 0.27
IRF3-223ENST00000599223 CEP55Q53EZ4 464 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 TMEM31Q5JXX7 168 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 GJD3Q8N144 294 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 UIMC1Q96RL1 719 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 RBM28Q9NW13 759 aaKnown RBP16.76■□□□□ 0.27
IRF3-223ENST00000599223 TRPV2Q9Y5S1 764 aa16.76■□□□□ 0.27
IRF3-223ENST00000599223 MRPL42Q9Y6G3 142 aaKnown RBP16.76■□□□□ 0.27
IRF3-223ENST00000599223 V9GY48 417 aaPredicted RBP16.76■□□□□ 0.27
IRF3-223ENST00000599223 MYH9P35579 1960 aaKnown RBP16.76■□□□□ 0.27
IRF3-223ENST00000599223 IGSF9BQ9UPX0 1349 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 KLF18A0A0U1RQI7 1052 aa16.75■□□□□ 0.27
IRF3-223ENST00000599223 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms