RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 TBCKQ8TEA7 893 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 PHF20Q9BVI0 1012 aa18.91■□□□□ 0.62
USHBP1-208ENST00000598309 ORC3Q9UBD5 711 aaPredicted RBP18.91■□□□□ 0.62
USHBP1-208ENST00000598309 TRIP12Q14669 1992 aaPredicted RBP18.91■□□□□ 0.62
USHBP1-208ENST00000598309 LAMA2P24043 3122 aaKnown RBP18.91■□□□□ 0.62
USHBP1-208ENST00000598309 DDX39AO00148 427 aaKnown RBP18.9■□□□□ 0.62
USHBP1-208ENST00000598309 EDIL3O43854 480 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 LARGE1O95461 756 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 RPLP2P05387 115 aaKnown RBP18.9■□□□□ 0.62
USHBP1-208ENST00000598309 ATP2A2P16615 1042 aaKnown RBP18.9■□□□□ 0.62
USHBP1-208ENST00000598309 STAT5BP51692 787 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 KRT76Q01546 638 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 FAM160B1Q5W0V3 765 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 ZNF746Q6NUN9 644 aaPredicted RBP18.9■□□□□ 0.62
USHBP1-208ENST00000598309 MIS18BP1Q6P0N0 1132 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 MOXD1Q6UVY6 613 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 ABHD15Q6UXT9 468 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 KRT25Q7Z3Z0 450 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 SMAP1Q8IYB5 467 aaPredicted RBP18.9■□□□□ 0.62
USHBP1-208ENST00000598309 TCEAL9Q9UHQ7 104 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 MSRAQ9UJ68 235 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 TUBE1Q9UJT0 475 aa18.9■□□□□ 0.62
USHBP1-208ENST00000598309 CYP3A7-CYP3A51PA0A087WV96 503 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 RRN3P2A6NIE6 340 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 EFCAB14O75071 495 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 CYP3A7P24462 503 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 PBX2P40425 430 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 PLCB4Q15147 1175 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 NONOQ15233 471 aaKnown RBP eCLIP18.89■□□□□ 0.61
USHBP1-208ENST00000598309 Q4G0T1 1027 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 FAM26DQ5JW98 314 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 NECAB1Q8N987 351 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 FAM161BQ96MY7 647 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 KCNJ14Q9UNX9 436 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 TRPC6Q9Y210 931 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 PCDHA11Q9Y5I1 949 aa18.89■□□□□ 0.61
USHBP1-208ENST00000598309 TET1Q8NFU7 2136 aa18.88■□□□□ 0.61
USHBP1-208ENST00000598309 ABHD14A-ACY1A0A1B0GW23 586 aa18.88■□□□□ 0.61
USHBP1-208ENST00000598309 BACH1O14867 736 aa18.88■□□□□ 0.61
USHBP1-208ENST00000598309 INSRRP14616 1297 aa18.88■□□□□ 0.61
USHBP1-208ENST00000598309 MARCH8Q5T0T0 291 aa18.88■□□□□ 0.61
USHBP1-208ENST00000598309 MBOAT7Q96N66 472 aa18.88■□□□□ 0.61
USHBP1-208ENST00000598309 RIT2Q99578 217 aa18.88■□□□□ 0.61
USHBP1-208ENST00000598309 ZNF576Q9H609 170 aa18.88■□□□□ 0.61
USHBP1-208ENST00000598309 POTEB3A0JP26 581 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 MSH4O15457 936 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 FDPSP14324 419 aaKnown RBP18.87■□□□□ 0.61
USHBP1-208ENST00000598309 KCNJ6P48051 423 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 RBM25P49756 843 aaKnown RBP18.87■□□□□ 0.61
USHBP1-208ENST00000598309 WDR5P61964 334 aaKnown RBP18.87■□□□□ 0.61
USHBP1-208ENST00000598309 POTEBQ6S5H4 581 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 RSPH3Q86UC2 560 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 CCDC60Q8IWA6 550 aaPredicted RBP18.87■□□□□ 0.61
USHBP1-208ENST00000598309 NSUN7Q8NE18 718 aaKnown RBP18.87■□□□□ 0.61
USHBP1-208ENST00000598309 ATP8B4Q8TF62 1192 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 SLC5A5Q92911 643 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 CDX2Q99626 313 aaPredicted RBP18.87■□□□□ 0.61
USHBP1-208ENST00000598309 KIF2CQ99661 725 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 ZNF302Q9NR11 478 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 LIMCH1Q9UPQ0 1083 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 YBX2Q9Y2T7 364 aaKnown RBP18.87■□□□□ 0.61
USHBP1-208ENST00000598309 PCDHA10Q9Y5I2 948 aa18.87■□□□□ 0.61
USHBP1-208ENST00000598309 CCDC194A0A1B0GVG4 234 aa18.86■□□□□ 0.61
USHBP1-208ENST00000598309 WDR64B1ANS9 1081 aa18.86■□□□□ 0.61
USHBP1-208ENST00000598309 HBP1O60381 514 aa18.86■□□□□ 0.61
USHBP1-208ENST00000598309 PSAPP07602 524 aa18.86■□□□□ 0.61
USHBP1-208ENST00000598309 CTSHP09668 335 aa18.86■□□□□ 0.61
USHBP1-208ENST00000598309 IKBKEQ14164 716 aa18.86■□□□□ 0.61
USHBP1-208ENST00000598309 PLEKHG4Q58EX7 1191 aa18.86■□□□□ 0.61
USHBP1-208ENST00000598309 PDXDC2PQ6P474 469 aa18.86■□□□□ 0.61
USHBP1-208ENST00000598309 RUFY4Q6ZNE9 571 aa18.86■□□□□ 0.61
USHBP1-208ENST00000598309 COL1A2P08123 1366 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 KAT6AQ92794 2004 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 GAS7O60861 476 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 TDP2O95551 362 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 SFNP31947 248 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 RABGGTBP53611 331 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 IGBP1P78318 339 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 ST3GAL1Q11201 340 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 INF2Q27J81 1249 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 LRCH2Q5VUJ6 765 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 SWSAP1Q6NVH7 229 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 HERC6Q8IVU3 1022 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 SEPT8Q92599 483 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 UIMC1Q96RL1 719 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 TEKT3Q9BXF9 490 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 NKX2-4Q9H2Z4 354 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 SLC28A3Q9HAS3 691 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 BRMS1Q9HCU9 246 aa18.85■□□□□ 0.61
USHBP1-208ENST00000598309 MAFBQ9Y5Q3 323 aaPredicted RBP18.85■□□□□ 0.61
USHBP1-208ENST00000598309 IGSF9BQ9UPX0 1349 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 GCFC2P16383 781 aaKnown RBP18.84■□□□□ 0.61
USHBP1-208ENST00000598309 MGAT3Q09327 533 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
USHBP1-208ENST00000598309 GRIN2CQ14957 1233 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 TCTN1Q2MV58 587 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 NEK8Q86SG6 692 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 DBF4BQ8NFT6 615 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 RDM1Q8NG50 284 aa18.84■□□□□ 0.61
USHBP1-208ENST00000598309 BBXQ8WY36 941 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms