RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 SWSAP1Q6NVH7 229 aa22.9■■□□□ 1.26
PNKP-211ENST00000598020 RNPEPQ9H4A4 650 aa22.9■■□□□ 1.26
PNKP-211ENST00000598020 TTC12Q9H892 705 aaPredicted RBP22.9■■□□□ 1.26
PNKP-211ENST00000598020 SAMM50Q9Y512 469 aa22.9■■□□□ 1.26
PNKP-211ENST00000598020 KAT6AQ92794 2004 aa22.9■■□□□ 1.26
PNKP-211ENST00000598020 IGSF9BQ9UPX0 1349 aa22.89■■□□□ 1.26
PNKP-211ENST00000598020 BACH1O14867 736 aa22.89■■□□□ 1.25
PNKP-211ENST00000598020 CHMP2AO43633 222 aa22.89■■□□□ 1.25
PNKP-211ENST00000598020 CLTBP09497 229 aa22.89■■□□□ 1.25
PNKP-211ENST00000598020 SMIM10L2AP0DMW4 78 aa22.89■■□□□ 1.25
PNKP-211ENST00000598020 SMIM10L2BP0DMW5 78 aa22.89■■□□□ 1.25
PNKP-211ENST00000598020 TXKP42681 527 aa22.89■■□□□ 1.25
PNKP-211ENST00000598020 C7orf61Q8IZ16 206 aa22.89■■□□□ 1.25
PNKP-211ENST00000598020 TNPO1Q92973 898 aaKnown RBP22.89■■□□□ 1.25
PNKP-211ENST00000598020 EML1O00423 815 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 B4GALT4O60513 344 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 PRPHP41219 470 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 CHMP4BP1P59074 171 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 PTGDRQ13258 359 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 PLCB4Q15147 1175 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 EPHA7Q15375 998 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 PDXDC2PQ6P474 469 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 TRPV6Q9H1D0 765 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 PDLIM7Q9NR12 457 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 GABBR1Q9UBS5 961 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 TBX21Q9UL17 535 aa22.88■■□□□ 1.25
PNKP-211ENST00000598020 NRCAMQ92823 1304 aa22.87■■□□□ 1.25
PNKP-211ENST00000598020 KIAA0355O15063 1070 aa22.87■■□□□ 1.25
PNKP-211ENST00000598020 ZSCAN22P10073 491 aaPredicted RBP22.87■■□□□ 1.25
PNKP-211ENST00000598020 ATP4AP20648 1035 aa22.87■■□□□ 1.25
PNKP-211ENST00000598020 GDF6Q6KF10 455 aaPredicted RBP22.87■■□□□ 1.25
PNKP-211ENST00000598020 ATP8B4Q8TF62 1192 aa22.87■■□□□ 1.25
PNKP-211ENST00000598020 PPP1R13LQ8WUF5 828 aa22.87■■□□□ 1.25
PNKP-211ENST00000598020 CTAGE1Q96RT6 745 aa22.87■■□□□ 1.25
PNKP-211ENST00000598020 TRMT13Q9NUP7 481 aaKnown RBP22.87■■□□□ 1.25
PNKP-211ENST00000598020 CEP290O15078 2479 aa22.87■■□□□ 1.25
PNKP-211ENST00000598020 DNAH12Q6ZR08 3092 aa22.87■■□□□ 1.25
PNKP-211ENST00000598020 TRIP12Q14669 1992 aaPredicted RBP22.87■■□□□ 1.25
PNKP-211ENST00000598020 C17orf102A2RUQ5 167 aa22.86■■□□□ 1.25
PNKP-211ENST00000598020 BMP15O95972 392 aa22.86■■□□□ 1.25
PNKP-211ENST00000598020 GNAT1P11488 350 aa22.86■■□□□ 1.25
PNKP-211ENST00000598020 MARK3P27448 753 aa22.86■■□□□ 1.25
PNKP-211ENST00000598020 FXR2P51116 673 aaKnown RBP eCLIP22.86■■□□□ 1.25
PNKP-211ENST00000598020 ADAM17P78536 824 aa22.86■■□□□ 1.25
PNKP-211ENST00000598020 ATP2C1P98194 919 aaPredicted RBP22.86■■□□□ 1.25
PNKP-211ENST00000598020 HIC1Q14526 733 aa22.86■■□□□ 1.25
PNKP-211ENST00000598020 PTGISQ16647 500 aa22.86■■□□□ 1.25
PNKP-211ENST00000598020 ATP6V0A1Q93050 837 aa22.86■■□□□ 1.25
PNKP-211ENST00000598020 POTEB3A0JP26 581 aa22.85■■□□□ 1.25
PNKP-211ENST00000598020 HBP1O60381 514 aa22.85■■□□□ 1.25
PNKP-211ENST00000598020 P4HBP07237 508 aaKnown RBP22.85■■□□□ 1.25
PNKP-211ENST00000598020 PSMC5P62195 406 aa22.85■■□□□ 1.25
PNKP-211ENST00000598020 PDIA5Q14554 519 aa22.85■■□□□ 1.25
PNKP-211ENST00000598020 ARL6IP4Q66PJ3 421 aaKnown RBP22.85■■□□□ 1.25
PNKP-211ENST00000598020 NCAPH2Q6IBW4 605 aa22.85■■□□□ 1.25
PNKP-211ENST00000598020 POTEBQ6S5H4 581 aa22.85■■□□□ 1.25
PNKP-211ENST00000598020 BBXQ8WY36 941 aaPredicted RBP22.85■■□□□ 1.25
PNKP-211ENST00000598020 FAM167AQ96KS9 214 aa22.85■■□□□ 1.25
PNKP-211ENST00000598020 TMEM39AQ9NV64 488 aa22.85■■□□□ 1.25
PNKP-211ENST00000598020 TRIM43BA6NCK2 446 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 RRN3P2A6NIE6 340 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 ZNF862O60290 1169 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 INSRRP14616 1297 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 PPFIA1Q13136 1202 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 UGCGQ16739 394 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 SH3RF1Q7Z6J0 888 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 NEK9Q8TD19 979 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 LMBR1Q8WVP7 490 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 TRIM43Q96BQ3 446 aaPredicted RBP22.84■■□□□ 1.25
PNKP-211ENST00000598020 HSD17B14Q9BPX1 270 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 SETD4Q9NVD3 440 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 PRKAG2Q9UGJ0 569 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 CEP131Q9UPN4 1083 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 TRPC6Q9Y210 931 aa22.84■■□□□ 1.25
PNKP-211ENST00000598020 TNRC18O15417 2968 aaPredicted RBP22.83■■□□□ 1.25
PNKP-211ENST00000598020 MBLAC1A4D2B0 266 aaPredicted RBP22.83■■□□□ 1.25
PNKP-211ENST00000598020 DKC1O60832 514 aaKnown RBP eCLIP22.83■■□□□ 1.25
PNKP-211ENST00000598020 BRD1O95696 1058 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 F13A1P00488 732 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 TECP42680 631 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 QARSP47897 775 aaKnown RBP22.83■■□□□ 1.25
PNKP-211ENST00000598020 PTK7Q13308 1070 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 PKP1Q13835 747 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 GRIK4Q16099 956 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 TMEM266Q2M3C6 531 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 ZNF484Q5JVG2 852 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 NRBP2Q9NSY0 501 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 NOD1Q9Y239 953 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 MORC2Q9Y6X9 1032 aaPredicted RBP22.83■■□□□ 1.25
PNKP-211ENST00000598020 COL1A2P08123 1366 aa22.83■■□□□ 1.25
PNKP-211ENST00000598020 STBD1O95210 358 aa22.82■■□□□ 1.24
PNKP-211ENST00000598020 OATP04181 439 aa22.82■■□□□ 1.24
PNKP-211ENST00000598020 ZNF200P98182 395 aaPredicted RBP22.82■■□□□ 1.24
PNKP-211ENST00000598020 RBL2Q08999 1139 aa22.82■■□□□ 1.24
PNKP-211ENST00000598020 SF3A1Q15459 793 aaKnown RBP22.82■■□□□ 1.24
PNKP-211ENST00000598020 XKR3Q5GH77 459 aa22.82■■□□□ 1.24
PNKP-211ENST00000598020 MARCH8Q5T0T0 291 aa22.82■■□□□ 1.24
PNKP-211ENST00000598020 FAM173BQ6P4H8 233 aa22.82■■□□□ 1.24
PNKP-211ENST00000598020 DTHD1Q6ZMT9 781 aa22.82■■□□□ 1.24
PNKP-211ENST00000598020 SERINC5Q86VE9 423 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms