RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 LINC00271P0C7V0 271 aa13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 NAPAP54920 295 aa13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 ADCK5Q3MIX3 580 aa13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 CDHR1Q96JP9 859 aa13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 FAM49AQ9H0Q0 323 aaPredicted RBP13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 EHMT1Q9H9B1 1298 aa13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 TMEM260Q9NX78 707 aa13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 ERAP1Q9NZ08 941 aa13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 ADGRA3Q8IWK6 1321 aa13.86□□□□□ -0.19
SOX2-OT-228ENST00000597828 MBLAC1A4D2B0 266 aaPredicted RBP13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 FAM86C2PA6NEL3 165 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 H3BNC9 293 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 H3BQ06 376 aaPredicted RBP13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 ARP10275 920 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 INSRRP14616 1297 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 CTNNB1P35222 781 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 TMEM62Q0P6H9 643 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 FUT2Q10981 343 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 TCEAL5Q5H9L2 206 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 TAF2Q6P1X5 1199 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 SAMD11Q96NU1 681 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 NEK1Q96PY6 1258 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 MXRA8Q9BRK3 442 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 ANO3Q9BYT9 981 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 SMARCAD1Q9H4L7 1026 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 AGO3Q9H9G7 860 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 RC3H2Q9HBD1 1191 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 JPH1Q9HDC5 661 aaPredicted RBP13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 KCNH7Q9NS40 1196 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 SLC9A2Q9UBY0 812 aa13.85□□□□□ -0.19
SOX2-OT-228ENST00000597828 DDX39AO00148 427 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 STXBP3O00186 592 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 ADAMTS3O15072 1205 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 CDC27P30260 824 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 CD52P31358 61 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 MRPS6P82932 125 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 ITGB3BPQ13352 177 aaPredicted RBP13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 PLCB4Q15147 1175 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 RTN1Q16799 776 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 LEXMQ3ZCV2 418 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 RPAINQ86UA6 219 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 FIBCD1Q8N539 461 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 BANK1Q8NDB2 785 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 UIMC1Q96RL1 719 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 LRFN3Q9BTN0 628 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 C11orf16Q9NQ32 467 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
SOX2-OT-228ENST00000597828 GOLGA8AA7E2F4 631 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 GOLGA8BA8MQT2 603 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 ZBTB43O43298 467 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 CPA1P15085 419 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 ACTR2P61160 394 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 EXOSC10Q01780 885 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 PTPROQ16827 1216 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 TIGD5Q53EQ6 642 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 PTCRAQ6ISU1 281 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 TSHZ1Q6ZSZ6 1077 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 EP400NLQ6ZTU2 488 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 IL17RAQ96F46 866 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 C1QTNF1Q9BXJ1 281 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 RIC8AQ9NPQ8 531 aa13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 FAM217BQ9NTX9 383 aaPredicted RBP13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 RBM28Q9NW13 759 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-228ENST00000597828 KLF18A0A0U1RQI7 1052 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 ENPP3O14638 875 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 GRM6O15303 877 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 GATMP50440 423 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 ADCY7P51828 1080 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 SYNE3Q6ZMZ3 975 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 RSPH3Q86UC2 560 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 RTN4RL1Q86UN2 441 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 FAM178BQ8IXR5 827 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 NEK9Q8TD19 979 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 SDF4Q9BRK5 362 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 NSUN3Q9H649 340 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 AGO4Q9HCK5 861 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 TRPV2Q9Y5S1 764 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 V9GY48 417 aaPredicted RBP13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 NFASCO94856 1347 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 KMT2EQ8IZD2 1858 aa13.82□□□□□ -0.2
SOX2-OT-228ENST00000597828 SMCO2A6NFE2 343 aa13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 CCNE2O96020 404 aa13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 IBSPP21815 317 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 GTF2F1P35269 517 aaKnown RBP eCLIP13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 SREBF1P36956 1147 aa13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 CLK2P49760 499 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 PAN2Q504Q3 1202 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 RNF20Q5VTR2 975 aa13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 PPP1R18Q6NYC8 613 aa13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 DHX32Q7L7V1 743 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 ZNF689Q96CS4 500 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 PABPC5Q96DU9 382 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 AZI2Q9H6S1 392 aa13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 CLDND1Q9NY35 253 aa13.81□□□□□ -0.2
SOX2-OT-228ENST00000597828 NAP1L2Q9ULW6 460 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms