RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 TRAF7Q6Q0C0 670 aa17.52■□□□□ 0.4
XRCC1-206ENST00000597811 KRT25Q7Z3Z0 450 aa17.52■□□□□ 0.4
XRCC1-206ENST00000597811 DAGLBQ8NCG7 672 aa17.52■□□□□ 0.4
XRCC1-206ENST00000597811 LLPHQ9BRT6 129 aaKnown RBP17.52■□□□□ 0.4
XRCC1-206ENST00000597811 TCEAL9Q9UHQ7 104 aa17.52■□□□□ 0.4
XRCC1-206ENST00000597811 SIP14410 1827 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 C17orf102A2RUQ5 167 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 FAM86B1E9PN63 330 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 NBNO60934 754 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 CYP3A4P08684 503 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 FAM86B2P0C5J1 330 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 HMGN5P82970 282 aaKnown RBP17.51■□□□□ 0.39
XRCC1-206ENST00000597811 ST3GAL1Q11201 340 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 ZNF618Q5T7W0 954 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 SERINC5Q86VE9 423 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 RNPEPQ9H4A4 650 aa17.51■□□□□ 0.39
XRCC1-206ENST00000597811 AGO4Q9HCK5 861 aaKnown RBP17.51■□□□□ 0.39
XRCC1-206ENST00000597811 MEIS1O00470 390 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 TREHO43280 583 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 CXCL10P02778 98 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 SETQ01105 290 aaPredicted RBP17.5■□□□□ 0.39
XRCC1-206ENST00000597811 GUCY1B3Q02153 619 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 GNL2Q13823 731 aaKnown RBP17.5■□□□□ 0.39
XRCC1-206ENST00000597811 MBTPS1Q14703 1052 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 SAFBQ15424 915 aaKnown RBP eCLIP17.5■□□□□ 0.39
XRCC1-206ENST00000597811 TCTN1Q2MV58 587 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 PIK3AP1Q6ZUJ8 805 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 NIPA1Q7RTP0 329 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 ATP6V0A1Q93050 837 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 C8orf76Q96K31 380 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 ZNF577Q9BSK1 485 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 PRDM12Q9H4Q4 367 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 SLC28A3Q9HAS3 691 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
XRCC1-206ENST00000597811 SLC9A2Q9UBY0 812 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
XRCC1-206ENST00000597811 WDR81Q562E7 1941 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 BAIAP3O94812 1187 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 PARNO95453 639 aaKnown RBP17.49■□□□□ 0.39
XRCC1-206ENST00000597811 TCF7P36402 384 aaPredicted RBP17.49■□□□□ 0.39
XRCC1-206ENST00000597811 USP11P51784 963 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 INF2Q27J81 1249 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 LETM2Q2VYF4 491 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 KRT40Q6A162 431 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 OXER1Q8TDS5 423 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 SEPT1Q8WYJ6 367 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 GLG1Q92896 1179 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 TMX3Q96JJ7 454 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 SETD4Q9NVD3 440 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 ZNF215Q9UL58 517 aaPredicted RBP17.49■□□□□ 0.39
XRCC1-206ENST00000597811 XIRP2A4UGR9 3374 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 LOXHD1Q8IVV2 1947 aa17.49■□□□□ 0.39
XRCC1-206ENST00000597811 GSTTP1A0A1W2PQM5 241 aa17.48■□□□□ 0.39
XRCC1-206ENST00000597811 IPO5O00410 1097 aaKnown RBP17.48■□□□□ 0.39
XRCC1-206ENST00000597811 CD2BP2O95400 341 aaKnown RBP17.48■□□□□ 0.39
XRCC1-206ENST00000597811 THPOP40225 353 aa17.48■□□□□ 0.39
XRCC1-206ENST00000597811 NPY5RQ15761 445 aa17.48■□□□□ 0.39
XRCC1-206ENST00000597811 PPP2R2DQ66LE6 453 aa17.48■□□□□ 0.39
XRCC1-206ENST00000597811 CNKSR3Q6P9H4 555 aa17.48■□□□□ 0.39
XRCC1-206ENST00000597811 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.48■□□□□ 0.39
XRCC1-206ENST00000597811 PHOSPHO2Q8TCD6 241 aa17.48■□□□□ 0.39
XRCC1-206ENST00000597811 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
XRCC1-206ENST00000597811 M0R2N6 131 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 MARCH6O60337 910 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 MMP1P03956 469 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 WDR5P61964 334 aaKnown RBP17.47■□□□□ 0.39
XRCC1-206ENST00000597811 ADAM17P78536 824 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 NR5A1Q13285 461 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 ITGB3BPQ13352 177 aaPredicted RBP17.47■□□□□ 0.39
XRCC1-206ENST00000597811 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 DIS3L2Q8IYB7 885 aaKnown RBP17.47■□□□□ 0.39
XRCC1-206ENST00000597811 LMBR1Q8WVP7 490 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 CRYGNQ8WXF5 182 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 GAS2L1Q99501 681 aaPredicted RBP17.47■□□□□ 0.39
XRCC1-206ENST00000597811 AZI2Q9H6S1 392 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 SAMM50Q9Y512 469 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 MYH9P35579 1960 aaKnown RBP17.47■□□□□ 0.39
XRCC1-206ENST00000597811 PRRC2BQ5JSZ5 2229 aaKnown RBP17.47■□□□□ 0.39
XRCC1-206ENST00000597811 NFASCO94856 1347 aa17.47■□□□□ 0.39
XRCC1-206ENST00000597811 IGLV3-22A0A075B6J6 115 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 RSPH10B2B2RC85 870 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 BTBD18B2RXH4 712 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 BACH1O14867 736 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 CCNT1O60563 726 aaKnown RBP17.46■□□□□ 0.39
XRCC1-206ENST00000597811 TDP2O95551 362 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 CA3P07451 260 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 RSPH10BP0C881 870 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 MARK3P27448 753 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 CIITAP33076 1130 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 KCNJ6P48051 423 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 ACTR2P61160 394 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 DEFB103AP81534 67 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 ADGRE1Q14246 886 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 TMCO2Q7Z6W1 182 aaPredicted RBP17.46■□□□□ 0.39
XRCC1-206ENST00000597811 NEK8Q86SG6 692 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 USP38Q8NB14 1042 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 TBC1D22BQ9NU19 505 aa17.46■□□□□ 0.39
XRCC1-206ENST00000597811 DDX25Q9UHL0 483 aaKnown RBP17.46■□□□□ 0.39
XRCC1-206ENST00000597811 COL4A4P53420 1690 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms