RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 LRRC8DQ7L1W4 858 aa23.9■■□□□ 1.42
PNKP-209ENST00000596726 TNFRSF25Q93038 417 aa23.9■■□□□ 1.42
PNKP-209ENST00000596726 AZI2Q9H6S1 392 aa23.9■■□□□ 1.42
PNKP-209ENST00000596726 KRT2P35908 639 aa23.89■■□□□ 1.41
PNKP-209ENST00000596726 SLC5A5Q92911 643 aa23.89■■□□□ 1.41
PNKP-209ENST00000596726 RIT2Q99578 217 aa23.89■■□□□ 1.41
PNKP-209ENST00000596726 PARNO95453 639 aaKnown RBP23.88■■□□□ 1.41
PNKP-209ENST00000596726 MMP1P03956 469 aa23.88■■□□□ 1.41
PNKP-209ENST00000596726 SLC26A2P50443 739 aa23.88■■□□□ 1.41
PNKP-209ENST00000596726 SMAD3P84022 425 aaKnown RBP23.88■■□□□ 1.41
PNKP-209ENST00000596726 KRT76Q01546 638 aa23.88■■□□□ 1.41
PNKP-209ENST00000596726 PPFIA1Q13136 1202 aa23.88■■□□□ 1.41
PNKP-209ENST00000596726 NR5A1Q13285 461 aa23.88■■□□□ 1.41
PNKP-209ENST00000596726 EARS2Q5JPH6 523 aaKnown RBP23.88■■□□□ 1.41
PNKP-209ENST00000596726 ZNF618Q5T7W0 954 aa23.88■■□□□ 1.41
PNKP-209ENST00000596726 KRT40Q6A162 431 aa23.88■■□□□ 1.41
PNKP-209ENST00000596726 DEFB128Q7Z7B8 93 aa23.88■■□□□ 1.41
PNKP-209ENST00000596726 SMAP1Q8IYB5 467 aaPredicted RBP23.88■■□□□ 1.41
PNKP-209ENST00000596726 MBLAC1A4D2B0 266 aaPredicted RBP23.87■■□□□ 1.41
PNKP-209ENST00000596726 ST18O60284 1047 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 PLCB4Q15147 1175 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 GRIK4Q16099 956 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 MARCH8Q5T0T0 291 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 PPP4R3AQ6IN85 833 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 MIS18BP1Q6P0N0 1132 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 PIK3AP1Q6ZUJ8 805 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 OTOP2Q7RTS6 562 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 NEK8Q86SG6 692 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 CCDC60Q8IWA6 550 aaPredicted RBP23.87■■□□□ 1.41
PNKP-209ENST00000596726 ETNPPLQ8TBG4 499 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 BACH2Q9BYV9 841 aa23.87■■□□□ 1.41
PNKP-209ENST00000596726 CXXC1Q9P0U4 656 aaPredicted RBP23.87■■□□□ 1.41
PNKP-209ENST00000596726 CAND2O75155 1236 aa23.86■■□□□ 1.41
PNKP-209ENST00000596726 PSMD10O75832 226 aa23.86■■□□□ 1.41
PNKP-209ENST00000596726 CXCL10P02778 98 aa23.86■■□□□ 1.41
PNKP-209ENST00000596726 INSRRP14616 1297 aa23.86■■□□□ 1.41
PNKP-209ENST00000596726 THPOP40225 353 aa23.86■■□□□ 1.41
PNKP-209ENST00000596726 LETM2Q2VYF4 491 aa23.86■■□□□ 1.41
PNKP-209ENST00000596726 FAM160B1Q5W0V3 765 aa23.86■■□□□ 1.41
PNKP-209ENST00000596726 MTIF3Q9H2K0 278 aaKnown RBP23.86■■□□□ 1.41
PNKP-209ENST00000596726 BRMS1Q9HCU9 246 aa23.86■■□□□ 1.41
PNKP-209ENST00000596726 PCDHA10Q9Y5I2 948 aa23.86■■□□□ 1.41
PNKP-209ENST00000596726 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.85■■□□□ 1.41
PNKP-209ENST00000596726 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.85■■□□□ 1.41
PNKP-209ENST00000596726 RRN3P2A6NIE6 340 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 BTBD18B2RXH4 712 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 BACH1O14867 736 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 NBNO60934 754 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 HMGN5P82970 282 aaKnown RBP23.85■■□□□ 1.41
PNKP-209ENST00000596726 TRIM29Q14134 588 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 MBTPS1Q14703 1052 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 LRCH2Q5VUJ6 765 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 SWSAP1Q6NVH7 229 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 B3GNT9Q6UX72 402 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 RPAINQ86UA6 219 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 TNPO1Q92973 898 aaKnown RBP23.85■■□□□ 1.41
PNKP-209ENST00000596726 GJA10Q969M2 543 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 ZNF302Q9NR11 478 aa23.85■■□□□ 1.41
PNKP-209ENST00000596726 DDX25Q9UHL0 483 aaKnown RBP23.85■■□□□ 1.41
PNKP-209ENST00000596726 MAFBQ9Y5Q3 323 aaPredicted RBP23.85■■□□□ 1.41
PNKP-209ENST00000596726 POTEB3A0JP26 581 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 FAM205CA6NFA0 338 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 SLC37A4O43826 429 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 GAS7O60861 476 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 CD2BP2O95400 341 aaKnown RBP23.84■■□□□ 1.41
PNKP-209ENST00000596726 PSAPP07602 524 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 GCFC2P16383 781 aaKnown RBP23.84■■□□□ 1.41
PNKP-209ENST00000596726 ATP4AP20648 1035 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 FOSBP53539 338 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 FAM109BQ6ICB4 259 aaPredicted RBP23.84■■□□□ 1.41
PNKP-209ENST00000596726 POTEBQ6S5H4 581 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 DIS3L2Q8IYB7 885 aaKnown RBP23.84■■□□□ 1.41
PNKP-209ENST00000596726 TEKT3Q9BXF9 490 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 TCEAL9Q9UHQ7 104 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 TUBE1Q9UJT0 475 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 TRPC6Q9Y210 931 aa23.84■■□□□ 1.41
PNKP-209ENST00000596726 WDR64B1ANS9 1081 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 RSPH10B2B2RC85 870 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 RSPH10BP0C881 870 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 TAF2Q6P1X5 1199 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 PDXDC2PQ6P474 469 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 RUFY4Q6ZNE9 571 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 ATP8B4Q8TF62 1192 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 NAP1L4Q99733 375 aaKnown RBP23.83■■□□□ 1.41
PNKP-209ENST00000596726 FTOQ9C0B1 505 aaKnown RBP eCLIP23.83■■□□□ 1.41
PNKP-209ENST00000596726 UNC45AQ9H3U1 944 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 KCNMB3Q9NPA1 279 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 DISC1Q9NRI5 854 aa23.83■■□□□ 1.41
PNKP-209ENST00000596726 GBF1Q92538 1859 aa23.83■■□□□ 1.4
PNKP-209ENST00000596726 HBP1O60381 514 aa23.82■■□□□ 1.4
PNKP-209ENST00000596726 ACTN1P12814 892 aa23.82■■□□□ 1.4
PNKP-209ENST00000596726 SFNP31947 248 aa23.82■■□□□ 1.4
PNKP-209ENST00000596726 IGBP1P78318 339 aa23.82■■□□□ 1.4
PNKP-209ENST00000596726 FAM26DQ5JW98 314 aa23.82■■□□□ 1.4
PNKP-209ENST00000596726 C8orf76Q96K31 380 aa23.82■■□□□ 1.4
PNKP-209ENST00000596726 EVPLQ92817 2033 aa23.82■■□□□ 1.4
PNKP-209ENST00000596726 SIP14410 1827 aa23.82■■□□□ 1.4
PNKP-209ENST00000596726 IGSF9BQ9UPX0 1349 aa23.82■■□□□ 1.4
PNKP-209ENST00000596726 CCNT1O60563 726 aaKnown RBP23.81■■□□□ 1.4
PNKP-209ENST00000596726 MCM2P49736 904 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms