RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 RWDD3Q9Y3V2 267 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 UBIAD1Q9Y5Z9 338 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 SLC12A7Q9Y666 1083 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 CDY2AQ9Y6F7 541 aa12.11□□□□□ -0.47
CHMP2A-202ENST00000596708 COL4A6Q14031 1691 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 MAFGO15525 162 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 CSPG5O95196 566 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 RB1P06400 928 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 BMPR1AP36894 532 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 LIFRP42702 1097 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 MGAT3Q09327 533 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 BTG3Q14201 252 aaPredicted RBP12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 FBXO47Q5MNV8 452 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 SYNE3Q6ZMZ3 975 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 HEATR3Q7Z4Q2 680 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 C11orf16Q9NQ32 467 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 JADE2Q9NQC1 790 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 FAM50BQ9Y247 325 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 PLXNA4Q9HCM2 1894 aa12.1□□□□□ -0.47
CHMP2A-202ENST00000596708 RRN3P2A6NIE6 340 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 M0QZ92 97 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 SLC27A2O14975 620 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 GRM6O15303 877 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 ALADP13716 330 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 INSRRP14616 1297 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 MRPS6P82932 125 aaKnown RBP12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 IER5Q5VY09 327 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 TSHZ1Q6ZSZ6 1077 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 MICU3Q86XE3 530 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 FANCBQ8NB91 859 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 TNPO1Q92973 898 aaKnown RBP12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 C11orf84Q9BUA3 381 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 LSG1Q9H089 658 aaKnown RBP12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 FAM49AQ9H0Q0 323 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 LMAN2LQ9H0V9 348 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 AZI2Q9H6S1 392 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 JPH1Q9HDC5 661 aaPredicted RBP12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 SLC9A2Q9UBY0 812 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 ADGRA3Q8IWK6 1321 aa12.09□□□□□ -0.47
CHMP2A-202ENST00000596708 MBLAC1A4D2B0 266 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 C5orf67F2Z3F1 127 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 NCK2O43639 380 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 RPLP2P05387 115 aaKnown RBP12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 CD52P31358 61 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 TMEM62Q0P6H9 643 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 COL9A3Q14050 684 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 MARCH8Q5T0T0 291 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 CREB3L3Q68CJ9 461 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 TMTC3Q6ZXV5 915 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 ZBTB10Q96DT7 871 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 UIMC1Q96RL1 719 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 MXRA8Q9BRK3 442 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 SDF4Q9BRK5 362 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 ESYT1Q9BSJ8 1104 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 IGFLR1Q9H665 355 aa12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 AGO3Q9H9G7 860 aaKnown RBP12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
CHMP2A-202ENST00000596708 PRR33A8MZF0 331 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 DGKIO75912 1065 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 IBSPP21815 317 aaPredicted RBP12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 STAT5BP51692 787 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 NAPAP54920 295 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 NECTIN1Q15223 517 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 CLUL1Q15846 466 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 CLP1Q92989 425 aaKnown RBP12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 ZNF689Q96CS4 500 aaPredicted RBP12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 PGBD1Q96JS3 809 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 PCYT2Q99447 389 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 FTHL17Q9BXU8 183 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 ALG13Q9NP73 1137 aaKnown RBP12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 ANO2Q9NQ90 1003 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 KCNH7Q9NS40 1196 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 TRPV2Q9Y5S1 764 aa12.07□□□□□ -0.48
CHMP2A-202ENST00000596708 LINC00271P0C7V0 271 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 STAG3L1P0CL83 205 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 ARP10275 920 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 ZNF76P36508 570 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 ACTR2P61160 394 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 PLCB4Q15147 1175 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 PAN2Q504Q3 1202 aaKnown RBP12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 WWC2Q6AWC2 1192 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 PLPPR4Q7Z2D5 763 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 RTN4RL1Q86UN2 441 aaPredicted RBP12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 SGMS1Q86VZ5 419 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 CYP2W1Q8TAV3 490 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 TRAPPC12Q8WVT3 735 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 CELF4Q9BZC1 486 aaKnown RBP12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 RC3H2Q9HBD1 1191 aaKnown RBP12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 RBM28Q9NW13 759 aaKnown RBP12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 PRKAG3Q9UGI9 489 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 LRFN2Q9ULH4 789 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 PADI3Q9ULW8 664 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 PCDHA2Q9Y5H9 948 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 SQORQ9Y6N5 450 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 NFASCO94856 1347 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 MYO10Q9HD67 2058 aa12.06□□□□□ -0.48
CHMP2A-202ENST00000596708 POTEB3A0JP26 581 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms