RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 FAM86C2PA6NEL3 165 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 LINC00271P0C7V0 271 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 TMEM62Q0P6H9 643 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 FUT2Q10981 343 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 LEXMQ3ZCV2 418 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 FBXO47Q5MNV8 452 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 RPAINQ86UA6 219 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 FIBCD1Q8N539 461 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 BANK1Q8NDB2 785 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 LINC01599Q8WXQ3 324 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 MXRA8Q9BRK3 442 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 LRFN3Q9BTN0 628 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 SMARCAD1Q9H4L7 1026 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 JPH1Q9HDC5 661 aaPredicted RBP18.41■□□□□ 0.54
LIM2-202ENST00000596399 C11orf16Q9NQ32 467 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 TMEM260Q9NX78 707 aa18.41■□□□□ 0.54
LIM2-202ENST00000596399 V9GY48 417 aaPredicted RBP18.41■□□□□ 0.54
LIM2-202ENST00000596399 CSPG5O95196 566 aa18.4■□□□□ 0.54
LIM2-202ENST00000596399 CD52P31358 61 aa18.4■□□□□ 0.54
LIM2-202ENST00000596399 NAPAP54920 295 aa18.4■□□□□ 0.54
LIM2-202ENST00000596399 EXOSC10Q01780 885 aaKnown RBP18.4■□□□□ 0.54
LIM2-202ENST00000596399 ITGB3BPQ13352 177 aaPredicted RBP18.4■□□□□ 0.54
LIM2-202ENST00000596399 PTPROQ16827 1216 aa18.4■□□□□ 0.54
LIM2-202ENST00000596399 EP400NLQ6ZTU2 488 aa18.4■□□□□ 0.54
LIM2-202ENST00000596399 SAMD11Q96NU1 681 aa18.4■□□□□ 0.54
LIM2-202ENST00000596399 NEK1Q96PY6 1258 aa18.4■□□□□ 0.54
LIM2-202ENST00000596399 UIMC1Q96RL1 719 aa18.4■□□□□ 0.54
LIM2-202ENST00000596399 RC3H2Q9HBD1 1191 aaKnown RBP18.4■□□□□ 0.54
LIM2-202ENST00000596399 SLC9A2Q9UBY0 812 aa18.4■□□□□ 0.54
LIM2-202ENST00000596399 COL4A6Q14031 1691 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 STXBP3O00186 592 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 ADAMTS3O15072 1205 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 CTNNB1P35222 781 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 ACTR2P61160 394 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 MRPS6P82932 125 aaKnown RBP18.39■□□□□ 0.53
LIM2-202ENST00000596399 PLCB4Q15147 1175 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 PTCRAQ6ISU1 281 aaPredicted RBP18.39■□□□□ 0.53
LIM2-202ENST00000596399 SYNE3Q6ZMZ3 975 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 RSPH3Q86UC2 560 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 RTN4RL1Q86UN2 441 aaPredicted RBP18.39■□□□□ 0.53
LIM2-202ENST00000596399 FAM178BQ8IXR5 827 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 RIC8AQ9NPQ8 531 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 FAM217BQ9NTX9 383 aaPredicted RBP18.39■□□□□ 0.53
LIM2-202ENST00000596399 TRPC6Q9Y210 931 aa18.39■□□□□ 0.53
LIM2-202ENST00000596399 GRM6O15303 877 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 MAFGO15525 162 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 CPA1P15085 419 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 CDC27P30260 824 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 RTN1Q16799 776 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 TSHZ1Q6ZSZ6 1077 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 NEK9Q8TD19 979 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 ANO3Q9BYT9 981 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 AGO4Q9HCK5 861 aaKnown RBP18.38■□□□□ 0.53
LIM2-202ENST00000596399 ATG2AQ2TAZ0 1938 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 ADGRA3Q8IWK6 1321 aa18.38■□□□□ 0.53
LIM2-202ENST00000596399 C5orf42Q9H799 3197 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 SMCO2A6NFE2 343 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 GRXCR2A6NFK2 248 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 DDX39AO00148 427 aaKnown RBP18.37■□□□□ 0.53
LIM2-202ENST00000596399 ZBTB43O43298 467 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 CCNE2O96020 404 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 BMPR1AP36894 532 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 ADCY7P51828 1080 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 TIGD5Q53EQ6 642 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 CEP55Q53EZ4 464 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 ZNF689Q96CS4 500 aaPredicted RBP18.37■□□□□ 0.53
LIM2-202ENST00000596399 NSUN3Q9H649 340 aaKnown RBP18.37■□□□□ 0.53
LIM2-202ENST00000596399 AZI2Q9H6S1 392 aa18.37■□□□□ 0.53
LIM2-202ENST00000596399 RBM28Q9NW13 759 aaKnown RBP18.37■□□□□ 0.53
LIM2-202ENST00000596399 KLF18A0A0U1RQI7 1052 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 RRN3P2A6NIE6 340 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 GOLGA8AA7E2F4 631 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 GOLGA8BA8MQT2 603 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 GTF2F1P35269 517 aaKnown RBP eCLIP18.36■□□□□ 0.53
LIM2-202ENST00000596399 BTG3Q14201 252 aaPredicted RBP18.36■□□□□ 0.53
LIM2-202ENST00000596399 RALGAPA2Q2PPJ7 1873 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 BMP2KLQ5H9B9 411 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 TMEM31Q5JXX7 168 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 RNF20Q5VTR2 975 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 DHX32Q7L7V1 743 aaKnown RBP18.36■□□□□ 0.53
LIM2-202ENST00000596399 GJD3Q8N144 294 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 SDF4Q9BRK5 362 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 ALG13Q9NP73 1137 aaKnown RBP18.36■□□□□ 0.53
LIM2-202ENST00000596399 CLDND1Q9NY35 253 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 PADI3Q9ULW8 664 aa18.36■□□□□ 0.53
LIM2-202ENST00000596399 MYO7AQ13402 2215 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 NFASCO94856 1347 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 C5orf67F2Z3F1 127 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 PI4K2BG5E9Z4 385 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 MEIS1O00470 390 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 DGKIO75912 1065 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 IBSPP21815 317 aaPredicted RBP18.35■□□□□ 0.53
LIM2-202ENST00000596399 SSTR3P32745 418 aaPredicted RBP18.35■□□□□ 0.53
LIM2-202ENST00000596399 ADD1P35611 737 aaKnown RBP18.35■□□□□ 0.53
LIM2-202ENST00000596399 LTBRP36941 435 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
LIM2-202ENST00000596399 GATMP50440 423 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 STAT5BP51692 787 aa18.35■□□□□ 0.53
LIM2-202ENST00000596399 DLX2Q07687 328 aaPredicted RBP18.35■□□□□ 0.53
LIM2-202ENST00000596399 CLUL1Q15846 466 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms