RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 MARK3P27448 753 aa28.9■■■□□ 2.22
ZNF558-203ENST00000595786 TAP1Q03518 808 aa28.9■■■□□ 2.22
ZNF558-203ENST00000595786 TRIM22Q8IYM9 498 aa28.9■■■□□ 2.22
ZNF558-203ENST00000595786 FAM177A1Q8N128 213 aaPredicted RBP28.9■■■□□ 2.22
ZNF558-203ENST00000595786 APBB2Q92870 758 aa28.9■■■□□ 2.22
ZNF558-203ENST00000595786 TUBE1Q9UJT0 475 aa28.9■■■□□ 2.22
ZNF558-203ENST00000595786 CUL9Q8IWT3 2517 aa28.9■■■□□ 2.22
ZNF558-203ENST00000595786 PTPRSQ13332 1948 aa28.89■■■□□ 2.22
ZNF558-203ENST00000595786 IGLV3-22A0A075B6J6 115 aa28.89■■■□□ 2.22
ZNF558-203ENST00000595786 IGFBP4P22692 258 aa28.89■■■□□ 2.22
ZNF558-203ENST00000595786 STAT5BP51692 787 aa28.89■■■□□ 2.22
ZNF558-203ENST00000595786 SETQ01105 290 aaPredicted RBP28.89■■■□□ 2.22
ZNF558-203ENST00000595786 NCOA5Q9HCD5 579 aaKnown RBP28.89■■■□□ 2.22
ZNF558-203ENST00000595786 UNC80Q8N2C7 3258 aa28.88■■■□□ 2.21
ZNF558-203ENST00000595786 IGKV6D-21A0A0A0MT36 114 aa28.88■■■□□ 2.21
ZNF558-203ENST00000595786 AMHP03971 560 aa28.88■■■□□ 2.21
ZNF558-203ENST00000595786 CIITAP33076 1130 aa28.88■■■□□ 2.21
ZNF558-203ENST00000595786 SSRP1Q08945 709 aaKnown RBP28.88■■■□□ 2.21
ZNF558-203ENST00000595786 MARCH8Q5T0T0 291 aa28.88■■■□□ 2.21
ZNF558-203ENST00000595786 CPLX2Q6PUV4 134 aaKnown RBP28.88■■■□□ 2.21
ZNF558-203ENST00000595786 TBC1D22BQ9NU19 505 aa28.88■■■□□ 2.21
ZNF558-203ENST00000595786 PDRG1Q9NUG6 133 aa28.88■■■□□ 2.21
ZNF558-203ENST00000595786 PRUNE2Q8WUY3 3088 aa28.87■■■□□ 2.21
ZNF558-203ENST00000595786 EIF5BO60841 1220 aaKnown RBP28.87■■■□□ 2.21
ZNF558-203ENST00000595786 CTSHP09668 335 aa28.87■■■□□ 2.21
ZNF558-203ENST00000595786 INSRRP14616 1297 aa28.87■■■□□ 2.21
ZNF558-203ENST00000595786 USP38Q8NB14 1042 aa28.87■■■□□ 2.21
ZNF558-203ENST00000595786 UPF3BQ9BZI7 483 aaKnown RBP28.87■■■□□ 2.21
ZNF558-203ENST00000595786 EYSQ5T1H1 3165 aa28.87■■■□□ 2.21
ZNF558-203ENST00000595786 MICAL3Q7RTP6 2002 aa28.86■■■□□ 2.21
ZNF558-203ENST00000595786 IPO5O00410 1097 aaKnown RBP28.86■■■□□ 2.21
ZNF558-203ENST00000595786 CPLX1O14810 134 aa28.86■■■□□ 2.21
ZNF558-203ENST00000595786 DHX15O43143 795 aaKnown RBP28.86■■■□□ 2.21
ZNF558-203ENST00000595786 ANAPC15P60006 121 aa28.86■■■□□ 2.21
ZNF558-203ENST00000595786 PLCB4Q15147 1175 aa28.86■■■□□ 2.21
ZNF558-203ENST00000595786 ABHD15Q6UXT9 468 aa28.86■■■□□ 2.21
ZNF558-203ENST00000595786 RUFY4Q6ZNE9 571 aa28.86■■■□□ 2.21
ZNF558-203ENST00000595786 C22orf23Q9BZE7 217 aa28.86■■■□□ 2.21
ZNF558-203ENST00000595786 INSL6Q9Y581 213 aa28.86■■■□□ 2.21
ZNF558-203ENST00000595786 DEXIO95424 95 aa28.85■■■□□ 2.21
ZNF558-203ENST00000595786 CHRNA1P02708 482 aa28.85■■■□□ 2.21
ZNF558-203ENST00000595786 USP11P51784 963 aa28.85■■■□□ 2.21
ZNF558-203ENST00000595786 FAM160B1Q5W0V3 765 aa28.85■■■□□ 2.21
ZNF558-203ENST00000595786 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.85■■■□□ 2.21
ZNF558-203ENST00000595786 ZNF577Q9BSK1 485 aa28.85■■■□□ 2.21
ZNF558-203ENST00000595786 VPS54Q9P1Q0 977 aa28.85■■■□□ 2.21
ZNF558-203ENST00000595786 TRPC6Q9Y210 931 aa28.85■■■□□ 2.21
ZNF558-203ENST00000595786 ADAMTS3O15072 1205 aa28.84■■■□□ 2.21
ZNF558-203ENST00000595786 CCNE2O96020 404 aa28.84■■■□□ 2.21
ZNF558-203ENST00000595786 NLRP5P59047 1200 aa28.84■■■□□ 2.21
ZNF558-203ENST00000595786 MGAT3Q09327 533 aa28.84■■■□□ 2.21
ZNF558-203ENST00000595786 IFIH1Q9BYX4 1025 aaKnown RBP28.84■■■□□ 2.21
ZNF558-203ENST00000595786 PCDHA2Q9Y5H9 948 aa28.84■■■□□ 2.21
ZNF558-203ENST00000595786 TRANK1O15050 2925 aa28.84■■■□□ 2.21
ZNF558-203ENST00000595786 POTEB3A0JP26 581 aa28.83■■■□□ 2.21
ZNF558-203ENST00000595786 GTPBP6O43824 516 aaPredicted RBP28.83■■■□□ 2.21
ZNF558-203ENST00000595786 ARHGEF15O94989 841 aa28.83■■■□□ 2.21
ZNF558-203ENST00000595786 HTRA4P83105 476 aaPredicted RBP28.83■■■□□ 2.21
ZNF558-203ENST00000595786 GALNT17Q6IS24 598 aa28.83■■■□□ 2.21
ZNF558-203ENST00000595786 ZNF746Q6NUN9 644 aaPredicted RBP28.83■■■□□ 2.21
ZNF558-203ENST00000595786 MIS18BP1Q6P0N0 1132 aa28.83■■■□□ 2.21
ZNF558-203ENST00000595786 POTEBQ6S5H4 581 aa28.83■■■□□ 2.21
ZNF558-203ENST00000595786 TMCO2Q7Z6W1 182 aaPredicted RBP28.83■■■□□ 2.21
ZNF558-203ENST00000595786 DNAJB3Q8WWF6 145 aa28.83■■■□□ 2.21
ZNF558-203ENST00000595786 ARNTL2Q8WYA1 636 aa28.83■■■□□ 2.21
ZNF558-203ENST00000595786 TOP1MTQ969P6 601 aa28.83■■■□□ 2.21
ZNF558-203ENST00000595786 SQORQ9Y6N5 450 aa28.83■■■□□ 2.21
ZNF558-203ENST00000595786 LCHNA4D1U4 455 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 HBP1O60381 514 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 PPFIA3O75145 1194 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 IGBP1P78318 339 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 IER5Q5VY09 327 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 SMAP1Q8IYB5 467 aaPredicted RBP28.82■■■□□ 2.2
ZNF558-203ENST00000595786 MYOCDQ8IZQ8 938 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 NME8Q8N427 588 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 PPM1EQ8WY54 764 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 OSBPL7Q9BZF2 842 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 CERS4Q9HA82 394 aa28.82■■■□□ 2.2
ZNF558-203ENST00000595786 BACH1O14867 736 aa28.81■■■□□ 2.2
ZNF558-203ENST00000595786 ERVK-21P61565 698 aa28.81■■■□□ 2.2
ZNF558-203ENST00000595786 KRT76Q01546 638 aa28.81■■■□□ 2.2
ZNF558-203ENST00000595786 FAM43BQ6ZT52 329 aaPredicted RBP28.81■■■□□ 2.2
ZNF558-203ENST00000595786 RASGRP4Q8TDF6 673 aa28.81■■■□□ 2.2
ZNF558-203ENST00000595786 ATP8B4Q8TF62 1192 aa28.81■■■□□ 2.2
ZNF558-203ENST00000595786 TGS1Q96RS0 853 aaKnown RBP28.81■■■□□ 2.2
ZNF558-203ENST00000595786 COL25A1Q9BXS0 654 aaPredicted RBP28.81■■■□□ 2.2
ZNF558-203ENST00000595786 ZNF302Q9NR11 478 aa28.81■■■□□ 2.2
ZNF558-203ENST00000595786 TCEAL9Q9UHQ7 104 aa28.81■■■□□ 2.2
ZNF558-203ENST00000595786 PCDHA4Q9UN74 947 aa28.81■■■□□ 2.2
ZNF558-203ENST00000595786 MTCH2Q9Y6C9 303 aa28.81■■■□□ 2.2
ZNF558-203ENST00000595786 SMIM35A0A1B0GVV1 85 aa28.8■■■□□ 2.2
ZNF558-203ENST00000595786 DDX39AO00148 427 aaKnown RBP28.8■■■□□ 2.2
ZNF558-203ENST00000595786 CDKL5O76039 1030 aa28.8■■■□□ 2.2
ZNF558-203ENST00000595786 CENPBP07199 599 aaPredicted RBP28.8■■■□□ 2.2
ZNF558-203ENST00000595786 MRPS6P82932 125 aaKnown RBP28.8■■■□□ 2.2
ZNF558-203ENST00000595786 PRR16Q569H4 304 aa28.8■■■□□ 2.2
ZNF558-203ENST00000595786 ATXN2LQ8WWM7 1075 aaKnown RBP28.8■■■□□ 2.2
ZNF558-203ENST00000595786 SYMPKQ92797 1274 aaKnown RBP28.8■■■□□ 2.2
ZNF558-203ENST00000595786 IL17RAQ96F46 866 aa28.8■■■□□ 2.2
ZNF558-203ENST00000595786 TSPYL2Q9H2G4 693 aaPredicted RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms