RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 DNAJC19Q96DA6 116 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 NACC1Q96RE7 527 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 ZSWIM4Q9H7M6 989 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 TELO2Q9Y4R8 837 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 PCDHA10Q9Y5I2 948 aa16.93■□□□□ 0.3
VRK3-207ENST00000594092 PVALEFA0A1B0GWK0 134 aa16.92■□□□□ 0.3
VRK3-207ENST00000594092 CA12O43570 354 aa16.92■□□□□ 0.3
VRK3-207ENST00000594092 CD44P16070 742 aaKnown RBP16.92■□□□□ 0.3
VRK3-207ENST00000594092 QARSP47897 775 aaKnown RBP16.92■□□□□ 0.3
VRK3-207ENST00000594092 APLP1P51693 650 aa16.92■□□□□ 0.3
VRK3-207ENST00000594092 ARSHQ5FYA8 562 aa16.92■□□□□ 0.3
VRK3-207ENST00000594092 CYFIP1Q7L576 1253 aa16.92■□□□□ 0.3
VRK3-207ENST00000594092 DPP9Q86TI2 863 aa16.92■□□□□ 0.3
VRK3-207ENST00000594092 FBXO16Q8IX29 292 aaPredicted RBP16.92■□□□□ 0.3
VRK3-207ENST00000594092 CCDC47Q96A33 483 aaKnown RBP16.92■□□□□ 0.3
VRK3-207ENST00000594092 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
VRK3-207ENST00000594092 EXOC1Q9NV70 894 aa16.92■□□□□ 0.3
VRK3-207ENST00000594092 DIS3Q9Y2L1 958 aaKnown RBP16.92■□□□□ 0.3
VRK3-207ENST00000594092 ZNF236Q9UL36 1845 aa16.92■□□□□ 0.3
VRK3-207ENST00000594092 PPP1R3GB7ZBB8 358 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 SORBS3O60504 671 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 AOC2O75106 756 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 LYPLA2O95372 231 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 ACTR2P61160 394 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 UGCGQ16739 394 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
VRK3-207ENST00000594092 GDAQ9Y2T3 454 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 NPHP3-ACAD11A0A0J9YXS1 232 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 IKBKBO14920 756 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 ARIH2O95376 493 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 PSMC5P62195 406 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 SP4Q02446 784 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 NEDD9Q14511 834 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 NCAPHQ15003 741 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 LY6KQ17RY6 165 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 CT47A1Q5JQC4 288 aaPredicted RBP16.91■□□□□ 0.3
VRK3-207ENST00000594092 MORN1Q5T089 497 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 KCNV1Q6PIU1 500 aa16.91■□□□□ 0.3
VRK3-207ENST00000594092 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
VRK3-207ENST00000594092 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
VRK3-207ENST00000594092 AP5Z1O43299 807 aa16.9■□□□□ 0.3
VRK3-207ENST00000594092 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
VRK3-207ENST00000594092 PSAPP07602 524 aa16.9■□□□□ 0.3
VRK3-207ENST00000594092 IDEP14735 1019 aa16.9■□□□□ 0.3
VRK3-207ENST00000594092 MYL5Q02045 173 aa16.9■□□□□ 0.3
VRK3-207ENST00000594092 MAMDC4Q6UXC1 1216 aa16.9■□□□□ 0.3
VRK3-207ENST00000594092 ABHD15Q6UXT9 468 aa16.9■□□□□ 0.3
VRK3-207ENST00000594092 C4orf19Q8IY42 314 aa16.9■□□□□ 0.3
VRK3-207ENST00000594092 MAML3Q96JK9 1138 aa16.9■□□□□ 0.3
VRK3-207ENST00000594092 RUSC1Q9BVN2 902 aa16.9■□□□□ 0.3
VRK3-207ENST00000594092 FARP2O94887 1054 aaPredicted RBP16.89■□□□□ 0.29
VRK3-207ENST00000594092 ALDH1A1P00352 501 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 ERCC5P28715 1186 aaPredicted RBP16.89■□□□□ 0.29
VRK3-207ENST00000594092 EHHADHQ08426 723 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 STK4Q13043 487 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 RINT1Q6NUQ1 792 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 CCDC62Q6P9F0 684 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 NPLOC4Q8TAT6 608 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 MED15Q96RN5 788 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 GABBR1Q9UBS5 961 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 DOCK3Q8IZD9 2030 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 SYNGAP1Q96PV0 1343 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 FRMD3A2A2Y4 597 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 ATG7O95352 703 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 GGPS1O95749 300 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.29
VRK3-207ENST00000594092 SUPT20HL2P0C7V6 817 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 PRCPP42785 496 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 CACNB1Q02641 598 aaPredicted RBP16.89■□□□□ 0.29
VRK3-207ENST00000594092 RAD51AP2Q09MP3 1159 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 COASYQ13057 564 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 MAP2K5Q13163 448 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 GIT2Q14161 759 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 KLHL10Q6JEL2 608 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 MIS18BP1Q6P0N0 1132 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 SARM1Q6SZW1 724 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 HPS3Q969F9 1004 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 GTPBP4Q9BZE4 634 aaKnown RBP16.89■□□□□ 0.29
VRK3-207ENST00000594092 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 VTA1Q9NP79 307 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 PDGFCQ9NRA1 345 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 PANK4Q9NVE7 773 aa16.89■□□□□ 0.29
VRK3-207ENST00000594092 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.89■□□□□ 0.29
VRK3-207ENST00000594092 DBR1Q9UK59 544 aaKnown RBP16.89■□□□□ 0.29
VRK3-207ENST00000594092 WDR81Q562E7 1941 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 SNAI1O95863 264 aaPredicted RBP16.88■□□□□ 0.29
VRK3-207ENST00000594092 SWSAP1Q6NVH7 229 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 TAPT1Q6NXT6 567 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 METTL7BQ6UX53 244 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 C1orf186Q6ZWK4 172 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 CCDC60Q8IWA6 550 aaPredicted RBP16.88■□□□□ 0.29
VRK3-207ENST00000594092 CCDC65Q8IXS2 484 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 TRMT44Q8IYL2 757 aaKnown RBP16.88■□□□□ 0.29
VRK3-207ENST00000594092 ADSSL1Q8N142 457 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 ENOX1Q8TC92 643 aaKnown RBP16.88■□□□□ 0.29
VRK3-207ENST00000594092 SCFD2Q8WU76 684 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 REEP2Q9BRK0 252 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 KATNBL1Q9H079 304 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 SLC5A4Q9NY91 659 aa16.88■□□□□ 0.29
VRK3-207ENST00000594092 LOXHD1Q8IVV2 1947 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms