RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PAXIP1Q6ZW49 1069 aaPredicted RBP23.18■■□□□ 1.3
PNKP-203ENST00000593946 ZNF784Q8NCA9 323 aaPredicted RBP23.18■■□□□ 1.3
PNKP-203ENST00000593946 GIMAP8Q8ND71 665 aaPredicted RBP23.18■■□□□ 1.3
PNKP-203ENST00000593946 GTPBP4Q9BZE4 634 aaKnown RBP23.18■■□□□ 1.3
PNKP-203ENST00000593946 BMP2KQ9NSY1 1161 aaPredicted RBP23.18■■□□□ 1.3
PNKP-203ENST00000593946 GDAQ9Y2T3 454 aa23.18■■□□□ 1.3
PNKP-203ENST00000593946 PCDHA10Q9Y5I2 948 aa23.18■■□□□ 1.3
PNKP-203ENST00000593946 ARID2Q68CP9 1835 aa23.18■■□□□ 1.3
PNKP-203ENST00000593946 SLC15A5A6NIM6 579 aa23.17■■□□□ 1.3
PNKP-203ENST00000593946 MYL5Q02045 173 aa23.17■■□□□ 1.3
PNKP-203ENST00000593946 EHHADHQ08426 723 aa23.17■■□□□ 1.3
PNKP-203ENST00000593946 CRHR2Q13324 411 aa23.17■■□□□ 1.3
PNKP-203ENST00000593946 KCNV1Q6PIU1 500 aa23.17■■□□□ 1.3
PNKP-203ENST00000593946 ARMCX2Q7L311 632 aa23.17■■□□□ 1.3
PNKP-203ENST00000593946 EEPD1Q7L9B9 569 aa23.17■■□□□ 1.3
PNKP-203ENST00000593946 DIS3Q9Y2L1 958 aaKnown RBP23.17■■□□□ 1.3
PNKP-203ENST00000593946 SMTNL1A8MU46 457 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 ZBTB39O15060 712 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 UGCGQ16739 394 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 CYFIP1Q7L576 1253 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 ANP32BQ92688 251 aaKnown RBP23.16■■□□□ 1.3
PNKP-203ENST00000593946 RASSF10A6NK89 507 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 ACTR2P61160 394 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 PSMC5P62195 406 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 NOGQ13253 232 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 GRM1Q13255 1194 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 C4orf19Q8IY42 314 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 MED15Q96RN5 788 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 CREBZFQ9NS37 354 aa23.16■■□□□ 1.3
PNKP-203ENST00000593946 FRMD3A2A2Y4 597 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 CA12O43570 354 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 IDEP14735 1019 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 YY1P25490 414 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 PRCPP42785 496 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 NEDD9Q14511 834 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 MAMDC4Q6UXC1 1216 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 ABHD15Q6UXT9 468 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 DPP9Q86TI2 863 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 FBXO16Q8IX29 292 aaPredicted RBP23.15■■□□□ 1.3
PNKP-203ENST00000593946 ENOX1Q8TC92 643 aaKnown RBP23.15■■□□□ 1.3
PNKP-203ENST00000593946 DDX41Q9UJV9 622 aaKnown RBP23.15■■□□□ 1.3
PNKP-203ENST00000593946 TELO2Q9Y4R8 837 aa23.15■■□□□ 1.3
PNKP-203ENST00000593946 NPHP3-ACAD11A0A0J9YXS1 232 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 AP5Z1O43299 807 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 FARP2O94887 1054 aaPredicted RBP23.14■■□□□ 1.3
PNKP-203ENST00000593946 ATG7O95352 703 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 ARIH2O95376 493 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 PSAPP07602 524 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 STK4Q13043 487 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 COBLL1Q53SF7 1204 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 MORN1Q5T089 497 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 RINT1Q6NUQ1 792 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 ADSSL1Q8N142 457 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 RUSC1Q9BVN2 902 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 HSD3B7Q9H2F3 369 aa23.14■■□□□ 1.3
PNKP-203ENST00000593946 DBR1Q9UK59 544 aaKnown RBP23.14■■□□□ 1.3
PNKP-203ENST00000593946 SYNGAP1Q96PV0 1343 aa23.14■■□□□ 1.29
PNKP-203ENST00000593946 COASYQ13057 564 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 GIT2Q14161 759 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 DEFB115Q30KQ5 88 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 KLHL10Q6JEL2 608 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 CCDC62Q6P9F0 684 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 C1orf186Q6ZWK4 172 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 CCDC65Q8IXS2 484 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 MAML3Q96JK9 1138 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 REEP2Q9BRK0 252 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 PANK4Q9NVE7 773 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 KCND2Q9NZV8 630 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 SORBS3O60504 671 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 KRT18P05783 430 aaKnown RBP23.13■■□□□ 1.29
PNKP-203ENST00000593946 APLP1P51693 650 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 SP4Q02446 784 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 PSMD2Q13200 908 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 LY6KQ17RY6 165 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 MIS18BP1Q6P0N0 1132 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 METTL7BQ6UX53 244 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 TRMT44Q8IYL2 757 aaKnown RBP23.13■■□□□ 1.29
PNKP-203ENST00000593946 KIAA0895Q8NCT3 520 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 CAPNS2Q96L46 248 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 VTA1Q9NP79 307 aa23.13■■□□□ 1.29
PNKP-203ENST00000593946 SYNRGQ9UMZ2 1314 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 GGPS1O95749 300 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 ALDH1A1P00352 501 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 SUPT20HL2P0C7V6 817 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 RAD51AP2Q09MP3 1159 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 CCDC60Q8IWA6 550 aaPredicted RBP23.12■■□□□ 1.29
PNKP-203ENST00000593946 SCFD2Q8WU76 684 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 ATP6V0A1Q93050 837 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 HPS3Q969F9 1004 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 GABBR1Q9UBS5 961 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 CTNND2Q9UQB3 1225 aa23.12■■□□□ 1.29
PNKP-203ENST00000593946 YWHABP31946 246 aaKnown RBP23.11■■□□□ 1.29
PNKP-203ENST00000593946 RARRES1P49788 294 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 TPM4P67936 248 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 CACNB1Q02641 598 aaPredicted RBP23.11■■□□□ 1.29
PNKP-203ENST00000593946 PAK1Q13153 545 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 STIM1Q13586 685 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 SARM1Q6SZW1 724 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 NPLOC4Q8TAT6 608 aa23.11■■□□□ 1.29
PNKP-203ENST00000593946 PDLIM2Q96JY6 352 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms