RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 NFXL1Q6ZNB6 911 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 RTN4RL1Q86UN2 441 aaPredicted RBP12.24□□□□□ -0.45
USE1-203ENST00000593597 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 ADGRA3Q8IWK6 1321 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 FANCBQ8NB91 859 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 TRAPPC12Q8WVT3 735 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 SEPT1Q8WYJ6 367 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 APBB2Q92870 758 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 ZNF689Q96CS4 500 aaPredicted RBP12.24□□□□□ -0.45
USE1-203ENST00000593597 C1QTNF1Q9BXJ1 281 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
USE1-203ENST00000593597 TUBE1Q9UJT0 475 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 CDY2AQ9Y6F7 541 aa12.24□□□□□ -0.45
USE1-203ENST00000593597 C5orf67F2Z3F1 127 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 ENPP3O14638 875 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 GRM6O15303 877 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 ARP10275 920 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 LTBRP36941 435 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 GNAQP50148 359 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 EXOSC10Q01780 885 aaKnown RBP12.23□□□□□ -0.45
USE1-203ENST00000593597 CAMK1Q14012 370 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 ADCK5Q3MIX3 580 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 PTCRAQ6ISU1 281 aaPredicted RBP12.23□□□□□ -0.45
USE1-203ENST00000593597 APOA5Q6Q788 366 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 HEATR3Q7Z4Q2 680 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 RASEFQ8IZ41 740 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 BANK1Q8NDB2 785 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 SAMD11Q96NU1 681 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 TMEM260Q9NX78 707 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 ERAP1Q9NZ08 941 aa12.23□□□□□ -0.45
USE1-203ENST00000593597 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 GRXCR2A6NFK2 248 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 PI4K2BG5E9Z4 385 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 STXBP3O00186 592 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 CALM1P0DP23 149 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 CALM2P0DP24 149 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 CALM3P0DP25 149 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 INSRRP14616 1297 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 CD52P31358 61 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 CTNNB1P35222 781 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 GTF2F1P35269 517 aaKnown RBP eCLIP12.22□□□□□ -0.45
USE1-203ENST00000593597 CLK2P49760 499 aaKnown RBP12.22□□□□□ -0.45
USE1-203ENST00000593597 IGBP1P78318 339 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 DLX2Q07687 328 aaPredicted RBP12.22□□□□□ -0.45
USE1-203ENST00000593597 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 TIGD5Q53EQ6 642 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 TAF2Q6P1X5 1199 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 TSHZ1Q6ZSZ6 1077 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 TMTC2Q8N394 836 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
USE1-203ENST00000593597 CLP1Q92989 425 aaKnown RBP12.22□□□□□ -0.45
USE1-203ENST00000593597 PABPC5Q96DU9 382 aaKnown RBP12.22□□□□□ -0.45
USE1-203ENST00000593597 IL17RAQ96F46 866 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 MXRA8Q9BRK3 442 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 JPH1Q9HDC5 661 aaPredicted RBP12.22□□□□□ -0.45
USE1-203ENST00000593597 ANO2Q9NQ90 1003 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 KCNH7Q9NS40 1196 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 SLC12A7Q9Y666 1083 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 ZNF318Q5VUA4 2279 aa12.22□□□□□ -0.45
USE1-203ENST00000593597 NFASCO94856 1347 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 SPDYE3A6NKU9 549 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 GPR37L1O60883 481 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 DGKIO75912 1065 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 CCNE2O96020 404 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 DNAJB1P25685 340 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 CDC27P30260 824 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 ACTR2P61160 394 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 MRPS6P82932 125 aaKnown RBP12.21□□□□□ -0.45
USE1-203ENST00000593597 TMEM62Q0P6H9 643 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 HYAL1Q12794 435 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 FIBCD1Q8N539 461 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 GLG1Q92896 1179 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 CDHR1Q96JP9 859 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 ANO3Q9BYT9 981 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 FAM49AQ9H0Q0 323 aaPredicted RBP12.21□□□□□ -0.45
USE1-203ENST00000593597 TMX1Q9H3N1 280 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 SMARCAD1Q9H4L7 1026 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 NSUN3Q9H649 340 aaKnown RBP12.21□□□□□ -0.45
USE1-203ENST00000593597 AGO4Q9HCK5 861 aaKnown RBP12.21□□□□□ -0.45
USE1-203ENST00000593597 RIC8AQ9NPQ8 531 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 SLC9A2Q9UBY0 812 aa12.21□□□□□ -0.45
USE1-203ENST00000593597 MRPL42Q9Y6G3 142 aaKnown RBP12.21□□□□□ -0.45
USE1-203ENST00000593597 IGKV6D-21A0A0A0MT36 114 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 LINC01565O15544 149 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 MGEA5O60502 916 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 TBX10O75333 385 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 CSPG5O95196 566 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 ATG7O95352 703 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 CPA1P15085 419 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 BMPR1AP36894 532 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 GATMP50440 423 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 PTPROQ16827 1216 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 TMEM31Q5JXX7 168 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 GJD3Q8N144 294 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 CRYGNQ8WXF5 182 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 TRPV2Q9Y5S1 764 aa12.2□□□□□ -0.46
USE1-203ENST00000593597 IGSF9BQ9UPX0 1349 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms