RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 ADAM21Q9UKJ8 722 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 STK38LQ9Y2H1 464 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 IFT88Q13099 833 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-228ENST00000592705 OXER1Q8TDS5 423 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 NLRP7Q8WX94 980 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 ISCA1Q9BUE6 129 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 MRFAP1Q9Y605 127 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 PTPRUQ92729 1446 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 FDX1P10109 184 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 BPIFB4P59827 614 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 DMP1Q13316 513 aaPredicted RBP13.78□□□□□ -0.2
DNMT1-228ENST00000592705 CCDC38Q502W7 563 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 UNC13DQ70J99 1090 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.78□□□□□ -0.2
DNMT1-228ENST00000592705 SLITRK6Q9H5Y7 841 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 RIPOR2Q9Y4F9 1068 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 CAPN15O75808 1086 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 TMEM191BP0C7N4 346 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 PLA2G4BP0C869 781 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 PSMC4P43686 418 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 CUL1Q13616 776 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
DNMT1-228ENST00000592705 STRIP1Q5VSL9 837 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 RNF207Q6ZRF8 634 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 CCL15-CCL14A0A0B4J2E2 113 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 TFRCP02786 760 aaKnown RBP13.78□□□□□ -0.2
DNMT1-228ENST00000592705 GPSM2P81274 684 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 MESDQ14696 234 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 CCL15Q16663 113 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 C7orf31Q8N865 590 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 MMS19Q96T76 1030 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 MMP19Q99542 508 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 HESX1Q9UBX0 185 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 AGLP35573 1532 aa13.78□□□□□ -0.2
DNMT1-228ENST00000592705 FAM170AA1A519 330 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 SUN1O94901 812 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 NSFP46459 744 aaKnown RBP13.77□□□□□ -0.2
DNMT1-228ENST00000592705 CCZ1BP86790 482 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 CCZ1P86791 482 aaPredicted RBP13.77□□□□□ -0.2
DNMT1-228ENST00000592705 LMNB2Q03252 620 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 TRIM11Q96F44 468 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 WDR11Q9BZH6 1224 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 ZNF609O15014 1411 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 VGLL3A8MV65 326 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 HMGB1P1B2RPK0 211 aaPredicted RBP13.77□□□□□ -0.2
DNMT1-228ENST00000592705 IFNB1P01574 187 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 RASA3Q14644 834 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 ATG9AQ7Z3C6 839 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 UHMK1Q8TAS1 419 aaKnown RBP13.77□□□□□ -0.2
DNMT1-228ENST00000592705 GSDMBQ8TAX9 411 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 DPF3Q92784 378 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 GCNT4Q9P109 453 aa13.77□□□□□ -0.2
DNMT1-228ENST00000592705 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-228ENST00000592705 HIP1RO75146 1068 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 EPHX2P34913 555 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 CACNB1Q02641 598 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-228ENST00000592705 NAA30Q147X3 362 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-228ENST00000592705 ANKRD13AQ8IZ07 590 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 ENAHQ8N8S7 591 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-228ENST00000592705 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 NT5C1BQ96P26 610 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 VCX3BQ9H321 246 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 SUGT1Q9Y2Z0 365 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 NEXMIFQ5QGS0 1516 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 PNMA6FA0A0J9YX94 578 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 PRCPP42785 496 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 VPS41P49754 854 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 DHX9Q08211 1270 aaKnown RBP13.77□□□□□ -0.21
DNMT1-228ENST00000592705 TTLL4Q14679 1199 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 FAM49AQ9H0Q0 323 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-228ENST00000592705 ZC3H13Q5T200 1668 aaKnown RBP13.77□□□□□ -0.21
DNMT1-228ENST00000592705 CAPN9O14815 690 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 ALDH1A1P00352 501 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 NR1D1P20393 614 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 STXBP2Q15833 593 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 SNRNP48Q6IEG0 339 aaKnown RBP13.77□□□□□ -0.21
DNMT1-228ENST00000592705 PHLDB2Q86SQ0 1253 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 CCDC127Q96BQ5 260 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 ZNF577Q9BSK1 485 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 PPP1R12CQ9BZL4 782 aa13.77□□□□□ -0.21
DNMT1-228ENST00000592705 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
DNMT1-228ENST00000592705 ASB14A6NK59 587 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 EIF3BP55884 814 aaKnown RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 PTK2Q05397 1052 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 ORC2Q13416 577 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 PROM2Q8N271 834 aa13.76□□□□□ -0.21
DNMT1-228ENST00000592705 GIMAP8Q8ND71 665 aaPredicted RBP13.76□□□□□ -0.21
DNMT1-228ENST00000592705 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms