RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 TMEM240Q5SV17 173 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 CPZQ66K79 652 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 CCSAPQ6IQ19 270 aaPredicted RBP8.29□□□□□ -1.08
VMP1-215ENST00000592619 VSIG10LQ86VR7 867 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 DTX1Q86Y01 620 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 DCP2Q8IU60 420 aaKnown RBP8.29□□□□□ -1.08
VMP1-215ENST00000592619 TRIM48Q8IWZ4 208 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 CCAR1Q8IX12 1150 aaKnown RBP8.29□□□□□ -1.08
VMP1-215ENST00000592619 TTC8Q8TAM2 541 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 LMBR1Q8WVP7 490 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 SP110Q9HB58 689 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 TOPORSQ9NS56 1045 aaPredicted RBP8.29□□□□□ -1.08
VMP1-215ENST00000592619 CCDC39Q9UFE4 941 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 LUC7L2Q9Y383 392 aaKnown RBP8.29□□□□□ -1.08
VMP1-215ENST00000592619 A0A1W2PQJ5 194 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 MAP4K4O95819 1239 aaPredicted RBP8.28□□□□□ -1.08
VMP1-215ENST00000592619 MT-CO1P00395 513 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 HPXP02790 462 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 U2AF1L5P0DN76 240 aaPredicted RBP8.28□□□□□ -1.08
VMP1-215ENST00000592619 FUT4P22083 530 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 PTX3P26022 381 aaPredicted RBP8.28□□□□□ -1.08
VMP1-215ENST00000592619 GNALP38405 381 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 RECQLP46063 649 aaPredicted RBP8.28□□□□□ -1.08
VMP1-215ENST00000592619 CYP4F8P98187 520 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 U2AF1Q01081 240 aaKnown RBP eCLIP8.28□□□□□ -1.081e-15■■■□□ 17.4
VMP1-215ENST00000592619 SNX17Q15036 470 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 EPHA7Q15375 998 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 CXorf57Q6NSI4 855 aaKnown RBP8.28□□□□□ -1.08
VMP1-215ENST00000592619 ZNF574Q6ZN55 896 aaPredicted RBP8.28□□□□□ -1.08
VMP1-215ENST00000592619 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.28□□□□□ -1.08
VMP1-215ENST00000592619 CCDC146Q8IYE0 955 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 C16orf92Q96LL3 132 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 USP36Q9P275 1121 aaKnown RBP8.28□□□□□ -1.08
VMP1-215ENST00000592619 ASH2LQ9UBL3 628 aa8.28□□□□□ -1.08
VMP1-215ENST00000592619 GOLGA6CA6NDK9 693 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 GOLGA6BA6NDN3 693 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 GOLGA8AA7E2F4 631 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 GOLGA8BA8MQT2 603 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 SLC27A2O14975 620 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 BUB1BO60566 1050 aaPredicted RBP8.27□□□□□ -1.09
VMP1-215ENST00000592619 GOLGA6DP0CG33 693 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
VMP1-215ENST00000592619 GDNFP39905 211 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 GPR3P46089 330 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 KIR3DS1Q14943 382 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 PCBP2Q15366 365 aaKnown RBP eCLIP8.27□□□□□ -1.099e-9■□□□□ 11.3
VMP1-215ENST00000592619 ESRP1Q6NXG1 681 aaKnown RBP8.27□□□□□ -1.09
VMP1-215ENST00000592619 PGM2L1Q6PCE3 622 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 C14orf80Q86SX3 495 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 NLRX1Q86UT6 975 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 NME9Q86XW9 330 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 CPA6Q8N4T0 437 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 MAGEB6Q8N7X4 407 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 ORAI2Q96SN7 254 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 AP5M1Q9H0R1 490 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 MKS1Q9NXB0 559 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 GOLGA6AQ9NYA3 693 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 MYOTQ9UBF9 498 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 IP6K2Q9UHH9 426 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 PNMA8BQ9ULN7 279 aaPredicted RBP8.27□□□□□ -1.09
VMP1-215ENST00000592619 ANKRD6Q9Y2G4 727 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 TELO2Q9Y4R8 837 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 MRFAP1Q9Y605 127 aa8.27□□□□□ -1.09
VMP1-215ENST00000592619 TOP2AP11388 1531 aaKnown RBP8.26□□□□□ -1.09
VMP1-215ENST00000592619 FAM90A27PA6NNH2 459 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 PSPNO60542 156 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 EFEMP2O95967 443 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 C4BPAP04003 597 aaKnown RBP8.26□□□□□ -1.09
VMP1-215ENST00000592619 PNLIPP16233 465 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 ATF3P18847 181 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 SPINK2P20155 84 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 SCAND1P57086 179 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 ADCY1Q08828 1119 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 TUSC3Q13454 348 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 TMEM132BQ14DG7 1078 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 MLC1Q15049 377 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 PDCD1Q15116 288 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 BTBD8Q5XKL5 378 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 BICRALQ6AI39 1079 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 LILRA2Q8N149 483 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 ACAP3Q96P50 834 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 C19orf73Q9NVV2 129 aa8.26□□□□□ -1.09
VMP1-215ENST00000592619 SGSM2O43147 1006 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 KDM1AO60341 852 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 CAND2O75155 1236 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 CATSPEREQ5SY80 951 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 NFXL1Q6ZNB6 911 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 CMIPQ8IY22 773 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 TTLL11Q8NHH1 800 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 CLEC4DQ8WXI8 215 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 SHISA4Q96DD7 197 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 MS4A5Q9H3V2 200 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 RC3H2Q9HBD1 1191 aaKnown RBP8.25□□□□□ -1.09
VMP1-215ENST00000592619 PAK6Q9NQU5 681 aaPredicted RBP8.25□□□□□ -1.09
VMP1-215ENST00000592619 PRDM7Q9NQW5 492 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 GIT1Q9Y2X7 761 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 PCDHB4Q9Y5E5 795 aa8.25□□□□□ -1.09
VMP1-215ENST00000592619 TCRBV5S2A0A599 114 aa8.24□□□□□ -1.09
VMP1-215ENST00000592619 KIAA1324LA8MWY0 1029 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms