RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 SMAP1Q8IYB5 467 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-217ENST00000592391 RIT2Q99578 217 aa16.45■□□□□ 0.22
DDX39A-217ENST00000592391 MTIF3Q9H2K0 278 aaKnown RBP16.45■□□□□ 0.22
DDX39A-217ENST00000592391 BRMS1Q9HCU9 246 aa16.45■□□□□ 0.22
DDX39A-217ENST00000592391 TCEAL9Q9UHQ7 104 aa16.45■□□□□ 0.22
DDX39A-217ENST00000592391 TANC1Q9C0D5 1861 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 BACH1O14867 736 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 MMP1P03956 469 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 SMAD3P84022 425 aaKnown RBP16.44■□□□□ 0.22
DDX39A-217ENST00000592391 TRIM29Q14134 588 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 GRIK4Q16099 956 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 ZNF618Q5T7W0 954 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 FAM160B1Q5W0V3 765 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 PIK3AP1Q6ZUJ8 805 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 OTOP2Q7RTS6 562 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 NEK8Q86SG6 692 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 SLC5A5Q92911 643 aa16.44■□□□□ 0.22
DDX39A-217ENST00000592391 TNPO1Q92973 898 aaKnown RBP16.44■□□□□ 0.22
DDX39A-217ENST00000592391 DDX25Q9UHL0 483 aaKnown RBP16.44■□□□□ 0.22
DDX39A-217ENST00000592391 LAMA2P24043 3122 aaKnown RBP16.43■□□□□ 0.22
DDX39A-217ENST00000592391 RRN3P2A6NIE6 340 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 GAS7O60861 476 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 CAND2O75155 1236 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 GCFC2P16383 781 aaKnown RBP16.43■□□□□ 0.22
DDX39A-217ENST00000592391 THPOP40225 353 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 HMGN5P82970 282 aaKnown RBP16.43■□□□□ 0.22
DDX39A-217ENST00000592391 NR5A1Q13285 461 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 GPNMBQ14956 572 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 PLCB4Q15147 1175 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 LRCH2Q5VUJ6 765 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 KRT40Q6A162 431 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 PPP4R3AQ6IN85 833 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 TRAF7Q6Q0C0 670 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 CCDC60Q8IWA6 550 aaPredicted RBP16.43■□□□□ 0.22
DDX39A-217ENST00000592391 TNFRSF25Q93038 417 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 FTOQ9C0B1 505 aaKnown RBP eCLIP16.43■□□□□ 0.22
DDX39A-217ENST00000592391 ZNF302Q9NR11 478 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 TRPC6Q9Y210 931 aa16.43■□□□□ 0.22
DDX39A-217ENST00000592391 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-217ENST00000592391 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-217ENST00000592391 MBLAC1A4D2B0 266 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-217ENST00000592391 WDR64B1ANS9 1081 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 CXCL10P02778 98 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 INSRRP14616 1297 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 FOSBP53539 338 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 EARS2Q5JPH6 523 aaKnown RBP16.42■□□□□ 0.22
DDX39A-217ENST00000592391 MARCH8Q5T0T0 291 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 SWSAP1Q6NVH7 229 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 TAF2Q6P1X5 1199 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 PDXDC2PQ6P474 469 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 DIS3L2Q8IYB7 885 aaKnown RBP16.42■□□□□ 0.22
DDX39A-217ENST00000592391 ETNPPLQ8TBG4 499 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 NAP1L4Q99733 375 aaKnown RBP16.42■□□□□ 0.22
DDX39A-217ENST00000592391 TEKT3Q9BXF9 490 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 BACH2Q9BYV9 841 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 CXXC1Q9P0U4 656 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-217ENST00000592391 TUBE1Q9UJT0 475 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 PCDHA10Q9Y5I2 948 aa16.42■□□□□ 0.22
DDX39A-217ENST00000592391 TRIP12Q14669 1992 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-217ENST00000592391 POTEB3A0JP26 581 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 RSPH10B2B2RC85 870 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 BTBD18B2RXH4 712 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 SLC37A4O43826 429 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 NBNO60934 754 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 PSMD10O75832 226 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 PSAPP07602 524 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 RSPH10BP0C881 870 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 ACTN1P12814 892 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 IGBP1P78318 339 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 POTEBQ6S5H4 581 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 RPAINQ86UA6 219 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 ATP8B4Q8TF62 1192 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 GJA10Q969M2 543 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 C8orf76Q96K31 380 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 UNC45AQ9H3U1 944 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 DISC1Q9NRI5 854 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 SAMM50Q9Y512 469 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 MAFBQ9Y5Q3 323 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-217ENST00000592391 SCN5AQ14524 2016 aa16.41■□□□□ 0.22
DDX39A-217ENST00000592391 FAM205CA6NFA0 338 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 HBP1O60381 514 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 CCNT1O60563 726 aaKnown RBP16.4■□□□□ 0.22
DDX39A-217ENST00000592391 CD2BP2O95400 341 aaKnown RBP16.4■□□□□ 0.22
DDX39A-217ENST00000592391 SFNP31947 248 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 MCM2P49736 904 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 JAK3P52333 1124 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 MBTPS1Q14703 1052 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 SAFBQ15424 915 aaKnown RBP eCLIP16.4■□□□□ 0.22
DDX39A-217ENST00000592391 FAM109BQ6ICB4 259 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-217ENST00000592391 RUFY4Q6ZNE9 571 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 FAM184AQ8NB25 1140 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 KCNMB3Q9NPA1 279 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 GABBR1Q9UBS5 961 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 SLC4A7Q9Y6M7 1214 aa16.4■□□□□ 0.22
DDX39A-217ENST00000592391 ZBBXA8MT70 800 aa16.39■□□□□ 0.21
DDX39A-217ENST00000592391 CHMP2AO43633 222 aa16.39■□□□□ 0.21
DDX39A-217ENST00000592391 BAIAP3O94812 1187 aa16.39■□□□□ 0.21
DDX39A-217ENST00000592391 CTSHP09668 335 aa16.39■□□□□ 0.21
DDX39A-217ENST00000592391 ATP4AP20648 1035 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms