RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 PTGDRQ13258 359 aa23.38■■□□□ 1.33
DNMT1-227ENST00000592342 TMEM266Q2M3C6 531 aa23.38■■□□□ 1.33
DNMT1-227ENST00000592342 PDXDC2PQ6P474 469 aa23.38■■□□□ 1.33
DNMT1-227ENST00000592342 CKAP2LQ8IYA6 745 aa23.38■■□□□ 1.33
DNMT1-227ENST00000592342 HDAC6Q9UBN7 1215 aa23.38■■□□□ 1.33
DNMT1-227ENST00000592342 TRPC6Q9Y210 931 aa23.38■■□□□ 1.33
DNMT1-227ENST00000592342 LAD1O00515 517 aa23.37■■□□□ 1.33
DNMT1-227ENST00000592342 SMIM10L2AP0DMW4 78 aa23.37■■□□□ 1.33
DNMT1-227ENST00000592342 SMIM10L2BP0DMW5 78 aa23.37■■□□□ 1.33
DNMT1-227ENST00000592342 SESTD1Q86VW0 696 aa23.37■■□□□ 1.33
DNMT1-227ENST00000592342 FAM126BQ8IXS8 530 aa23.37■■□□□ 1.33
DNMT1-227ENST00000592342 AFAP1L1Q8TED9 768 aa23.37■■□□□ 1.33
DNMT1-227ENST00000592342 RNPEPQ9H4A4 650 aa23.37■■□□□ 1.33
DNMT1-227ENST00000592342 PRDM5Q9NQX1 630 aaPredicted RBP23.37■■□□□ 1.33
DNMT1-227ENST00000592342 GTF2IRD1Q9UHL9 959 aa23.37■■□□□ 1.33
DNMT1-227ENST00000592342 SCN10AQ9Y5Y9 1956 aa23.36■■□□□ 1.33
DNMT1-227ENST00000592342 C17orf102A2RUQ5 167 aa23.36■■□□□ 1.33
DNMT1-227ENST00000592342 CLTBP09497 229 aa23.36■■□□□ 1.33
DNMT1-227ENST00000592342 ZSCAN22P10073 491 aaPredicted RBP23.36■■□□□ 1.33
DNMT1-227ENST00000592342 B3GNT9Q6UX72 402 aa23.36■■□□□ 1.33
DNMT1-227ENST00000592342 ATP6V0A1Q93050 837 aa23.36■■□□□ 1.33
DNMT1-227ENST00000592342 TRMT13Q9NUP7 481 aaKnown RBP23.36■■□□□ 1.33
DNMT1-227ENST00000592342 CEP131Q9UPN4 1083 aa23.36■■□□□ 1.33
DNMT1-227ENST00000592342 EML1O00423 815 aa23.35■■□□□ 1.33
DNMT1-227ENST00000592342 B4GALT4O60513 344 aa23.35■■□□□ 1.33
DNMT1-227ENST00000592342 GNAT1P11488 350 aa23.35■■□□□ 1.33
DNMT1-227ENST00000592342 TECP42680 631 aa23.35■■□□□ 1.33
DNMT1-227ENST00000592342 PLCB4Q15147 1175 aa23.35■■□□□ 1.33
DNMT1-227ENST00000592342 PTGISQ16647 500 aa23.35■■□□□ 1.33
DNMT1-227ENST00000592342 TRMT1LQ7Z2T5 733 aaKnown RBP23.35■■□□□ 1.33
DNMT1-227ENST00000592342 TRPV6Q9H1D0 765 aa23.35■■□□□ 1.33
DNMT1-227ENST00000592342 TMEM39AQ9NV64 488 aa23.35■■□□□ 1.33
DNMT1-227ENST00000592342 MAFBQ9Y5Q3 323 aaPredicted RBP23.35■■□□□ 1.33
DNMT1-227ENST00000592342 POTEB3A0JP26 581 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 BMP15O95972 392 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 F13A1P00488 732 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 SPIRE1Q08AE8 756 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 FAAP100Q0VG06 881 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 PPFIA1Q13136 1202 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 EPHA7Q15375 998 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 GDF6Q6KF10 455 aaPredicted RBP23.34■■□□□ 1.33
DNMT1-227ENST00000592342 FAM173BQ6P4H8 233 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 POTEBQ6S5H4 581 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 C4orf32Q8N8J7 132 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 BANK1Q8NDB2 785 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 RAB34Q9BZG1 259 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 SETD4Q9NVD3 440 aa23.34■■□□□ 1.33
DNMT1-227ENST00000592342 NRCAMQ92823 1304 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 IGSF9BQ9UPX0 1349 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 POTEMA6NI47 508 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 DKC1O60832 514 aaKnown RBP eCLIP23.33■■□□□ 1.33
DNMT1-227ENST00000592342 PRPHP41219 470 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 PSMC5P62195 406 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 ATP2C1P98194 919 aaPredicted RBP23.33■■□□□ 1.33
DNMT1-227ENST00000592342 PKP1Q13835 747 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 SF3A1Q15459 793 aaKnown RBP23.33■■□□□ 1.33
DNMT1-227ENST00000592342 DTHD1Q6ZMT9 781 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 ATP8B4Q8TF62 1192 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 FAM167AQ96KS9 214 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 PDLIM7Q9NR12 457 aa23.33■■□□□ 1.33
DNMT1-227ENST00000592342 ZMYND8Q9ULU4 1186 aaPredicted RBP23.33■■□□□ 1.33
DNMT1-227ENST00000592342 HBP1O60381 514 aa23.32■■□□□ 1.32
DNMT1-227ENST00000592342 CD4P01730 458 aa23.32■■□□□ 1.32
DNMT1-227ENST00000592342 P4HBP07237 508 aaKnown RBP23.32■■□□□ 1.32
DNMT1-227ENST00000592342 INSRRP14616 1297 aa23.32■■□□□ 1.32
DNMT1-227ENST00000592342 SYN1P17600 705 aa23.32■■□□□ 1.32
DNMT1-227ENST00000592342 IGBP1P78318 339 aa23.32■■□□□ 1.32
DNMT1-227ENST00000592342 GRIK4Q16099 956 aa23.32■■□□□ 1.32
DNMT1-227ENST00000592342 ERMNQ8TAM6 284 aa23.32■■□□□ 1.32
DNMT1-227ENST00000592342 BBXQ8WY36 941 aaPredicted RBP23.32■■□□□ 1.32
DNMT1-227ENST00000592342 ZNF396Q96N95 335 aaPredicted RBP23.32■■□□□ 1.32
DNMT1-227ENST00000592342 NRBP2Q9NSY0 501 aa23.32■■□□□ 1.32
DNMT1-227ENST00000592342 RRN3P2A6NIE6 340 aa23.31■■□□□ 1.32
DNMT1-227ENST00000592342 QARSP47897 775 aaKnown RBP23.31■■□□□ 1.32
DNMT1-227ENST00000592342 FXR2P51116 673 aaKnown RBP eCLIP23.31■■□□□ 1.321e-6■■□□□ 12.7
DNMT1-227ENST00000592342 PRKCEQ02156 737 aa23.31■■□□□ 1.32
DNMT1-227ENST00000592342 CEBPZQ03701 1054 aaKnown RBP23.31■■□□□ 1.32
DNMT1-227ENST00000592342 UGCGQ16739 394 aa23.31■■□□□ 1.32
DNMT1-227ENST00000592342 LMBR1Q8WVP7 490 aa23.31■■□□□ 1.32
DNMT1-227ENST00000592342 EIF2AK1Q9BQI3 630 aaKnown RBP23.31■■□□□ 1.32
DNMT1-227ENST00000592342 ALPK3Q96L96 1907 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 OATP04181 439 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 CYP2C9P11712 490 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 RAG1P15918 1043 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 ZNF200P98182 395 aaPredicted RBP23.3■■□□□ 1.32
DNMT1-227ENST00000592342 CYP4A11Q02928 519 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 FOXD4L6Q3SYB3 417 aaPredicted RBP23.3■■□□□ 1.32
DNMT1-227ENST00000592342 ARL6IP4Q66PJ3 421 aaKnown RBP23.3■■□□□ 1.32
DNMT1-227ENST00000592342 FOXD4L3Q6VB84 417 aaPredicted RBP23.3■■□□□ 1.32
DNMT1-227ENST00000592342 SH3RF1Q7Z6J0 888 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 TPH2Q8IWU9 490 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 NEK9Q8TD19 979 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 DYDC2Q96IM9 177 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 LRWD1Q9UFC0 647 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 CLIC4Q9Y696 253 aa23.3■■□□□ 1.32
DNMT1-227ENST00000592342 BRD1O95696 1058 aa23.29■■□□□ 1.32
DNMT1-227ENST00000592342 ATP4AP20648 1035 aa23.29■■□□□ 1.32
DNMT1-227ENST00000592342 CTTNQ14247 550 aaKnown RBP23.29■■□□□ 1.32
DNMT1-227ENST00000592342 XKR3Q5GH77 459 aa23.29■■□□□ 1.32
DNMT1-227ENST00000592342 ZNF484Q5JVG2 852 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms