RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SMIM10L2BP0DMW5 78 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 THPOP40225 353 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 HTRA4P83105 476 aaPredicted RBP11.97□□□□□ -0.49
VPS4B-207ENST00000591519 FAM26DQ5JW98 314 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 KRT40Q6A162 431 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.97□□□□□ -0.49
VPS4B-207ENST00000591519 TMCO2Q7Z6W1 182 aaPredicted RBP11.97□□□□□ -0.49
VPS4B-207ENST00000591519 NLRX1Q86UT6 975 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 MYL10Q9BUA6 226 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 PSTPIP2Q9H939 334 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 SUGCTQ9HAC7 445 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 INSL6Q9Y581 213 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 REV3LO60673 3130 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 LINC01553A4QN01 128 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 CCDC69A6NI79 296 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 SLC27A2O14975 620 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 MAFGO15525 162 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 PLEKHA8P1O95397 391 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 TFF2Q03403 129 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 COL9A3Q14050 684 aaPredicted RBP11.96□□□□□ -0.49
VPS4B-207ENST00000591519 SPRED2Q7Z698 418 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 RPAINQ86UA6 219 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 SGMS1Q86VZ5 419 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 TEX2Q8IWB9 1127 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 MICALL1Q8N3F8 863 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 FANCBQ8NB91 859 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 PIBF1Q8WXW3 757 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 GPRASP2Q96D09 838 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 CDHR1Q96JP9 859 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 TGS1Q96RS0 853 aaKnown RBP11.96□□□□□ -0.49
VPS4B-207ENST00000591519 UHRF1Q96T88 793 aaPredicted RBP11.96□□□□□ -0.49
VPS4B-207ENST00000591519 SETD4Q9NVD3 440 aa11.96□□□□□ -0.49
VPS4B-207ENST00000591519 SEC63Q9UGP8 760 aaKnown RBP11.96□□□□□ -0.49
VPS4B-207ENST00000591519 ZNF215Q9UL58 517 aaPredicted RBP11.96□□□□□ -0.49
VPS4B-207ENST00000591519 NRCAMQ92823 1304 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 ATP9AO75110 1047 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 AMHP03971 560 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 KCNA2P16389 499 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 ITGB5P18084 799 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 CREB3L3Q68CJ9 461 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 NFXL1Q6ZNB6 911 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 IL27Q8NEV9 243 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 SEPT1Q8WYJ6 367 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 SEPT8Q92599 483 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 HLA-CQ95604 372 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 TOP1MTQ969P6 601 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 EPAS1Q99814 870 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 TELO2Q9Y4R8 837 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 UBIAD1Q9Y5Z9 338 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 SLC12A7Q9Y666 1083 aa11.95□□□□□ -0.5
VPS4B-207ENST00000591519 TCF20Q9UGU0 1960 aaKnown RBP11.94□□□□□ -0.5
VPS4B-207ENST00000591519 GSTTP1A0A1W2PQM5 241 aa11.94□□□□□ -0.5
VPS4B-207ENST00000591519 KCNQ1P51787 676 aa11.94□□□□□ -0.5
VPS4B-207ENST00000591519 SKIV2LQ15477 1246 aaKnown RBP11.94□□□□□ -0.5
VPS4B-207ENST00000591519 TSGA10IPQ3SY00 556 aa11.94□□□□□ -0.5
VPS4B-207ENST00000591519 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
VPS4B-207ENST00000591519 CMTR1Q8N1G2 835 aaKnown RBP11.94□□□□□ -0.5
VPS4B-207ENST00000591519 LMBR1Q8WVP7 490 aa11.94□□□□□ -0.5
VPS4B-207ENST00000591519 ZFRQ96KR1 1074 aaKnown RBP11.94□□□□□ -0.5
VPS4B-207ENST00000591519 OSBPL7Q9BZF2 842 aa11.94□□□□□ -0.5
VPS4B-207ENST00000591519 JADE2Q9NQC1 790 aa11.94□□□□□ -0.5
VPS4B-207ENST00000591519 XIRP2A4UGR9 3374 aa11.94□□□□□ -0.5
VPS4B-207ENST00000591519 KAT6AQ92794 2004 aa11.94□□□□□ -0.5
VPS4B-207ENST00000591519 BDP1A6H8Y1 2624 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 DOCK5Q9H7D0 1870 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 MICAL3Q7RTP6 2002 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
VPS4B-207ENST00000591519 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.93□□□□□ -0.5
VPS4B-207ENST00000591519 MBLAC1A4D2B0 266 aaPredicted RBP11.93□□□□□ -0.5
VPS4B-207ENST00000591519 CHRNA1P02708 482 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 RXRAP19793 462 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 TCF7P36402 384 aaPredicted RBP11.93□□□□□ -0.5
VPS4B-207ENST00000591519 EXOSC10Q01780 885 aaKnown RBP11.93□□□□□ -0.5
VPS4B-207ENST00000591519 BMP2KLQ5H9B9 411 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 UTP14CQ5TAP6 766 aaKnown RBP11.93□□□□□ -0.5
VPS4B-207ENST00000591519 TAF2Q6P1X5 1199 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 TRIM50Q86XT4 487 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 MYOCDQ8IZQ8 938 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 APBB2Q92870 758 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 SAMD11Q96NU1 681 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 EHMT1Q9H9B1 1298 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 ERAP1Q9NZ08 941 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 PCDHA6Q9UN73 950 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 PCDHA8Q9Y5H6 950 aa11.93□□□□□ -0.5
VPS4B-207ENST00000591519 SPDYE3A6NKU9 549 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 ARHGAP4P98171 946 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 FUT2Q10981 343 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 MTMR1Q13613 665 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 RNF20Q5VTR2 975 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 FAM117BQ6P1L5 589 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 LAPTM4BQ86VI4 370 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 GDPD5Q8WTR4 605 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 SMARCAD1Q9H4L7 1026 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 ANO2Q9NQ90 1003 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 SIP14410 1827 aa11.92□□□□□ -0.5
VPS4B-207ENST00000591519 hCG_1642624A0A1W2PR95 340 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 RBAK-RBAKDNI3L0D1 243 aa11.91□□□□□ -0.5
VPS4B-207ENST00000591519 RPLP2P05387 115 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms