RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	WNT8B	Q93098	351 aa		10.42	□□□□□ -0.74
DNMT1-223	ENST00000591239	TRIP12	Q14669	1992 aa	Predicted RBP	10.42	□□□□□ -0.74
DNMT1-223	ENST00000591239	CDH23	Q9H251	3354 aa		10.42	□□□□□ -0.74
DNMT1-223	ENST00000591239	IGKV6D-21	A0A0A0MT36	114 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	BACH1	O14867	736 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	TDP2	O95551	362 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	MMP1	P03956	469 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	PFKM	P08237	780 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	KRT2	P35908	639 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	STAT5B	P51692	787 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	FOSB	P53539	338 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	KRT76	Q01546	638 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	PPFIA1	Q13136	1202 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	NR5A1	Q13285	461 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	TRIM29	Q14134	588 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	LETM2	Q2VYF4	491 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239		Q4G0T1	1027 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	ZNF618	Q5T7W0	954 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	RASIP1	Q5U651	963 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	GPR153	Q6NV75	609 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	MIS18BP1	Q6P0N0	1132 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	MOXD1	Q6UVY6	613 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	PIK3AP1	Q6ZUJ8	805 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	LRRC8D	Q7L1W4	858 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	LMBR1	Q8WVP7	490 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	HERVK_113	Q902F9	699 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	MBOAT7	Q96N66	472 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	RIT2	Q99578	217 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	BRMS1	Q9HCU9	246 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	TCEAL9	Q9UHQ7	104 aa		10.41	□□□□□ -0.74
DNMT1-223	ENST00000591239	BTBD18	B2RXH4	712 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	GAS7	O60861	476 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	SLC34A2	O95436	690 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	PARN	O95453	639 aa	Known RBP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	INSRR	P14616	1297 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	THPO	P40225	353 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	SLC26A2	P50443	739 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	HMGN5	P82970	282 aa	Known RBP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	SMAD3	P84022	425 aa	Known RBP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	GPNMB	Q14956	572 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	PLCB4	Q15147	1175 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	GRIK4	Q16099	956 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	EARS2	Q5JPH6	523 aa	Known RBP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	MARCH8	Q5T0T0	291 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	LRCH2	Q5VUJ6	765 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	FAM160B1	Q5W0V3	765 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	KRT40	Q6A162	431 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	PPP4R3A	Q6IN85	833 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	SWSAP1	Q6NVH7	229 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	PDXDC2P	Q6P474	469 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	NEK8	Q86SG6	692 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	SLC5A5	Q92911	643 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	TNPO1	Q92973	898 aa	Known RBP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	TNFRSF25	Q93038	417 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	GJA10	Q969M2	543 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	BACH2	Q9BYV9	841 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	MTIF3	Q9H2K0	278 aa	Known RBP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	DDX25	Q9UHL0	483 aa	Known RBP	10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	TRPC6	Q9Y210	931 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	PCDHA10	Q9Y5I2	948 aa		10.4	□□□□□ -0.74
DNMT1-223	ENST00000591239	CHD7	Q9P2D1	2997 aa		10.4	□□□□□ -0.75
DNMT1-223	ENST00000591239	EYS	Q5T1H1	3165 aa		10.4	□□□□□ -0.75
DNMT1-223	ENST00000591239	SCN5A	Q14524	2016 aa		10.4	□□□□□ -0.75
DNMT1-223	ENST00000591239	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	POTEB3	A0JP26	581 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	FAM205C	A6NFA0	338 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	RRN3P2	A6NIE6	340 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	WDR64	B1ANS9	1081 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	RSPH10B2	B2RC85	870 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	SLC37A4	O43826	429 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	CCNT1	O60563	726 aa	Known RBP	10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	NBN	O60934	754 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	PSMD10	O75832	226 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	CD2BP2	O95400	341 aa	Known RBP	10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	PSAP	P07602	524 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	RSPH10B	P0C881	870 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	GCFC2	P16383	781 aa	Known RBP	10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	IGBP1	P78318	339 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	GUCY1B3	Q02153	619 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	TRAF7	Q6Q0C0	670 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	POTEB	Q6S5H4	581 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	RUFY4	Q6ZNE9	571 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	DIS3L2	Q8IYB7	885 aa	Known RBP	10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	ETNPPL	Q8TBG4	499 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	C8orf76	Q96K31	380 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	TEKT3	Q9BXF9	490 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	ZNF302	Q9NR11	478 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	DISC1	Q9NRI5	854 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	TUBE1	Q9UJT0	475 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	SAMM50	Q9Y512	469 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	KAT6A	Q92794	2004 aa		10.39	□□□□□ -0.75
DNMT1-223	ENST00000591239	TANC1	Q9C0D5	1861 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms