RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 SWSAP1Q6NVH7 229 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 SLC44A5Q8NCS7 719 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 CD99L2Q8TCZ2 262 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 AKAP7Q9P0M2 348 aaPredicted RBP12.46□□□□□ -0.41
SEH1L-208ENST00000590843 EMSYQ7Z589 1322 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 BIN1O00499 593 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 RNF8O76064 485 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 CD4P01730 458 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 C1QTNF8P60827 252 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 PRPSAP1Q14558 356 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 CLUL1Q15846 466 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 C20orf194Q5TEA3 1177 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 ITIH5Q86UX2 942 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 FIBCD1Q8N539 461 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 DNERQ8NFT8 737 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 NT5C1BQ96P26 610 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 SLC7A5P2Q9GIP4 190 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 IQCGQ9H095 443 aaKnown RBP12.46□□□□□ -0.41
SEH1L-208ENST00000590843 GABBR1Q9UBS5 961 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 CYP2C19P33261 490 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 TBCKQ8TEA7 893 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 GPRASP2Q96D09 838 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 INTS4Q96HW7 963 aaKnown RBP12.46□□□□□ -0.41
SEH1L-208ENST00000590843 TSEN34Q9BSV6 310 aaKnown RBP12.46□□□□□ -0.41
SEH1L-208ENST00000590843 NOC4LQ9BVI4 516 aaKnown RBP12.46□□□□□ -0.41
SEH1L-208ENST00000590843 KIAA1024Q9UPX6 916 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 SH3BP1Q9Y3L3 701 aa12.46□□□□□ -0.41
SEH1L-208ENST00000590843 A6NJR5 290 aa12.46□□□□□ -0.42
SEH1L-208ENST00000590843 SARNPP82979 210 aaKnown RBP12.46□□□□□ -0.42
SEH1L-208ENST00000590843 ITKQ08881 620 aa12.46□□□□□ -0.42
SEH1L-208ENST00000590843 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.42
SEH1L-208ENST00000590843 TAX1BP1Q86VP1 789 aa12.46□□□□□ -0.42
SEH1L-208ENST00000590843 PPP1R14CQ8TAE6 165 aa12.46□□□□□ -0.42
SEH1L-208ENST00000590843 PARVGQ9HBI0 331 aa12.46□□□□□ -0.42
SEH1L-208ENST00000590843 KRT81Q14533 505 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 ZNF667Q5HYK9 610 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 SPRYD7Q5W111 196 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 CCDC84Q86UT8 332 aaPredicted RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 OR6B3Q8NGW1 331 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 RABGGTAQ92696 567 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 ASCC2Q9H1I8 757 aaPredicted RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 FAM8A1Q9UBU6 413 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 FGBP02675 491 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 MAIP1Q8WWC4 291 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 NAP1L3Q99457 506 aaPredicted RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 IKBKBO14920 756 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 PTK2Q05397 1052 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 EIF2B5Q13144 721 aaKnown RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 FAM26FQ5R3K3 315 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 ADAT2Q7Z6V5 191 aaKnown RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 NOSTRINQ8IVI9 506 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 CSGALNACT2Q8N6G5 542 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 MRPS17Q9Y2R5 130 aaKnown RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 FAM110CQ1W6H9 321 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 SPATA2LQ8IUW3 424 aaPredicted RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 CCDC42Q96M95 316 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 CCDC68Q9H2F9 335 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 LTBP3Q9NS15 1303 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 SPOPO43791 374 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 GRM4Q14833 912 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 TEX35Q5T0J7 233 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 TNIP3Q96KP6 325 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 SUCLA2Q9P2R7 463 aaPredicted RBP12.45□□□□□ -0.42
SEH1L-208ENST00000590843 PPME1Q9Y570 386 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 TACC3Q9Y6A5 838 aa12.45□□□□□ -0.42
SEH1L-208ENST00000590843 GPR25O00155 361 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 OR1G1P47890 313 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 EPHB1P54762 984 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 MFAP3P55082 362 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 LMBRD2Q68DH5 695 aaPredicted RBP12.44□□□□□ -0.42
SEH1L-208ENST00000590843 MRPS31Q92665 395 aaKnown RBP12.44□□□□□ -0.42
SEH1L-208ENST00000590843 NUP58Q9BVL2 599 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 FTHL17Q9BXU8 183 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 STN1Q9H668 368 aaKnown RBP12.44□□□□□ -0.42
SEH1L-208ENST00000590843 C11orf49Q9H6J7 331 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 ARMCX3Q9UH62 379 aaPredicted RBP12.44□□□□□ -0.42
SEH1L-208ENST00000590843 KCNJ14Q9UNX9 436 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 APOEP02649 317 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 HSPA1AP0DMV8 641 aaKnown RBP12.44□□□□□ -0.42
SEH1L-208ENST00000590843 HSPA1BP0DMV9 641 aaKnown RBP12.44□□□□□ -0.42
SEH1L-208ENST00000590843 VGLL4Q14135 290 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 MAPRE1Q15691 268 aaKnown RBP12.44□□□□□ -0.42
SEH1L-208ENST00000590843 NOTUMQ6P988 496 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 C4orf50Q6ZRC1 276 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 OSBP2Q969R2 916 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 TRIM11Q96F44 468 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 ACAP3Q96P50 834 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 KCNH3Q9ULD8 1083 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 ERCC5P28715 1186 aaPredicted RBP12.44□□□□□ -0.42
SEH1L-208ENST00000590843 NDUFV1P49821 464 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 USP11P51784 963 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 TRIM14Q14142 442 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 PALM2Q8IXS6 379 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 PPP1R9AQ9ULJ8 1098 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 TMEM131LA2VDJ0 1609 aa12.44□□□□□ -0.42
SEH1L-208ENST00000590843 RNASEH1O60930 286 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms