RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 CCDC83Q8IWF9 413 aa25.35■■□□□ 1.65
MBD3-208ENST00000590830 MBOAT7Q96N66 472 aa25.35■■□□□ 1.65
MBD3-208ENST00000590830 GNAT1P11488 350 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 PPFIA1Q13136 1202 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 GRIK4Q16099 956 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 Q4G0T1 1027 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 RUFY4Q6ZNE9 571 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 DEFB123Q8N688 67 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 SLC5A5Q92911 643 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 ZBTB10Q96DT7 871 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 OSBPL7Q9BZF2 842 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 AZI2Q9H6S1 392 aa25.34■■□□□ 1.65
MBD3-208ENST00000590830 CXCL10P02778 98 aa25.33■■□□□ 1.65
MBD3-208ENST00000590830 INSRRP14616 1297 aa25.33■■□□□ 1.65
MBD3-208ENST00000590830 ATP4AP20648 1035 aa25.33■■□□□ 1.65
MBD3-208ENST00000590830 ZNF746Q6NUN9 644 aaPredicted RBP25.33■■□□□ 1.65
MBD3-208ENST00000590830 SWSAP1Q6NVH7 229 aa25.33■■□□□ 1.65
MBD3-208ENST00000590830 CCDC60Q8IWA6 550 aaPredicted RBP25.33■■□□□ 1.65
MBD3-208ENST00000590830 TNFRSF25Q93038 417 aa25.33■■□□□ 1.65
MBD3-208ENST00000590830 FTOQ9C0B1 505 aaKnown RBP eCLIP25.33■■□□□ 1.65
MBD3-208ENST00000590830 FAM205CA6NFA0 338 aa25.32■■□□□ 1.64
MBD3-208ENST00000590830 PBX2P40425 430 aa25.32■■□□□ 1.64
MBD3-208ENST00000590830 NR5A1Q13285 461 aa25.32■■□□□ 1.64
MBD3-208ENST00000590830 ZSCAN31Q96LW9 406 aaPredicted RBP25.32■■□□□ 1.64
MBD3-208ENST00000590830 MTMR10Q9NXD2 777 aa25.32■■□□□ 1.64
MBD3-208ENST00000590830 MBLAC1A4D2B0 266 aaPredicted RBP25.31■■□□□ 1.64
MBD3-208ENST00000590830 RSPH10B2B2RC85 870 aa25.31■■□□□ 1.64
MBD3-208ENST00000590830 RSPH10BP0C881 870 aa25.31■■□□□ 1.64
MBD3-208ENST00000590830 FOSBP53539 338 aa25.31■■□□□ 1.64
MBD3-208ENST00000590830 RABEP1Q15276 862 aa25.31■■□□□ 1.64
MBD3-208ENST00000590830 MIS18BP1Q6P0N0 1132 aa25.31■■□□□ 1.64
MBD3-208ENST00000590830 MOXD1Q6UVY6 613 aa25.31■■□□□ 1.64
MBD3-208ENST00000590830 PIK3AP1Q6ZUJ8 805 aa25.31■■□□□ 1.64
MBD3-208ENST00000590830 RIT2Q99578 217 aa25.31■■□□□ 1.64
MBD3-208ENST00000590830 TET1Q8NFU7 2136 aa25.31■■□□□ 1.64
MBD3-208ENST00000590830 CCDC194A0A1B0GVG4 234 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 BACH1O14867 736 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 SLC37A4O43826 429 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 PSMD10O75832 226 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 PARNO95453 639 aaKnown RBP25.3■■□□□ 1.64
MBD3-208ENST00000590830 IGBP1P78318 339 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 KRT76Q01546 638 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 LETM2Q2VYF4 491 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 KRT40Q6A162 431 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 ETNPPLQ8TBG4 499 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 TRAPPC12Q8WVT3 735 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 MTIF3Q9H2K0 278 aaKnown RBP25.3■■□□□ 1.64
MBD3-208ENST00000590830 TTYH1Q9H313 450 aaPredicted RBP25.3■■□□□ 1.64
MBD3-208ENST00000590830 ZNF302Q9NR11 478 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 TRPC6Q9Y210 931 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 SLC4A7Q9Y6M7 1214 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 TANC1Q9C0D5 1861 aa25.3■■□□□ 1.64
MBD3-208ENST00000590830 POTEB3A0JP26 581 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 RRN3P2A6NIE6 340 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 ZBBXA8MT70 800 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 MMP1P03956 469 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 CTSHP09668 335 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 KRT2P35908 639 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 SLC26A2P50443 739 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 FAM160B1Q5W0V3 765 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 PDXDC2PQ6P474 469 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 POTEBQ6S5H4 581 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 SMAP1Q8IYB5 467 aaPredicted RBP25.29■■□□□ 1.64
MBD3-208ENST00000590830 FAM161BQ96MY7 647 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 TBC1D32Q96NH3 1257 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 LLPHQ9BRT6 129 aaKnown RBP25.29■■□□□ 1.64
MBD3-208ENST00000590830 PBX4Q9BYU1 374 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 SEMA6BQ9H3T3 888 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 UNC45AQ9H3U1 944 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 SH2B1Q9NRF2 756 aaPredicted RBP25.29■■□□□ 1.64
MBD3-208ENST00000590830 DDX25Q9UHL0 483 aaKnown RBP25.29■■□□□ 1.64
MBD3-208ENST00000590830 TUBE1Q9UJT0 475 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 PCDHA10Q9Y5I2 948 aa25.29■■□□□ 1.64
MBD3-208ENST00000590830 MAFBQ9Y5Q3 323 aaPredicted RBP25.29■■□□□ 1.64
MBD3-208ENST00000590830 BTBD18B2RXH4 712 aa25.28■■□□□ 1.64
MBD3-208ENST00000590830 CD2BP2O95400 341 aaKnown RBP25.28■■□□□ 1.64
MBD3-208ENST00000590830 ACTN1P12814 892 aa25.28■■□□□ 1.64
MBD3-208ENST00000590830 FAM26DQ5JW98 314 aa25.28■■□□□ 1.64
MBD3-208ENST00000590830 LRCH2Q5VUJ6 765 aa25.28■■□□□ 1.64
MBD3-208ENST00000590830 B3GNT9Q6UX72 402 aa25.28■■□□□ 1.64
MBD3-208ENST00000590830 NEK8Q86SG6 692 aa25.28■■□□□ 1.64
MBD3-208ENST00000590830 RPAINQ86UA6 219 aa25.28■■□□□ 1.64
MBD3-208ENST00000590830 ATP8B4Q8TF62 1192 aa25.28■■□□□ 1.64
MBD3-208ENST00000590830 GAS7O60861 476 aa25.27■■□□□ 1.64
MBD3-208ENST00000590830 CAND2O75155 1236 aa25.27■■□□□ 1.64
MBD3-208ENST00000590830 CHRNA1P02708 482 aa25.27■■□□□ 1.64
MBD3-208ENST00000590830 PSAPP07602 524 aa25.27■■□□□ 1.64
MBD3-208ENST00000590830 DNAJB2P25686 324 aa25.27■■□□□ 1.64
MBD3-208ENST00000590830 PPP4R3AQ6IN85 833 aa25.27■■□□□ 1.64
MBD3-208ENST00000590830 DNAJB3Q8WWF6 145 aa25.27■■□□□ 1.64
MBD3-208ENST00000590830 UPF2Q9HAU5 1272 aaKnown RBP25.27■■□□□ 1.64
MBD3-208ENST00000590830 DISC1Q9NRI5 854 aa25.27■■□□□ 1.64
MBD3-208ENST00000590830 GABBR1Q9UBS5 961 aa25.27■■□□□ 1.64
MBD3-208ENST00000590830 WDR64B1ANS9 1081 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 ZBTB42B2RXF5 422 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 RABGGTBP53611 331 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 GUCY1B3Q02153 619 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 TAF2Q6P1X5 1199 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 CNKSR3Q6P9H4 555 aa25.26■■□□□ 1.63
MBD3-208ENST00000590830 DIS3L2Q8IYB7 885 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms