RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 TMEM150BA6NC51 233 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 KLRC4O43908 158 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 SSBP05455 408 aaKnown RBP eCLIP18.92■□□□□ 0.62
GCDH-212ENST00000590530 GJC2Q5T442 439 aaPredicted RBP18.92■□□□□ 0.62
GCDH-212ENST00000590530 CNNM4Q6P4Q7 775 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 TRMT1LQ7Z2T5 733 aaKnown RBP18.92■□□□□ 0.62
GCDH-212ENST00000590530 LXNQ9BS40 222 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 GTPBP4Q9BZE4 634 aaKnown RBP18.92■□□□□ 0.62
GCDH-212ENST00000590530 LRRC27Q9C0I9 530 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 KATNBL1Q9H079 304 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 JPH1Q9HDC5 661 aaPredicted RBP18.92■□□□□ 0.62
GCDH-212ENST00000590530 DOCK3Q8IZD9 2030 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 ASB14A6NK59 587 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 TRPA1O75762 1119 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 RHOBTB3O94955 611 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 PLA2G4BP0C869 781 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 MAP2K5Q13163 448 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 TAPT1Q6NXT6 567 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 SV2BQ7L1I2 683 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 DYMQ7RTS9 669 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 USP6NLQ92738 828 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 CDHR1Q96JP9 859 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 POLD4Q9HCU8 107 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.92■□□□□ 0.62
GCDH-212ENST00000590530 SLC9A2Q9UBY0 812 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 DDX41Q9UJV9 622 aaKnown RBP18.92■□□□□ 0.62
GCDH-212ENST00000590530 ZSWIM8A7E2V4 1837 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 NFASCO94856 1347 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 DOCK5Q9H7D0 1870 aa18.92■□□□□ 0.62
GCDH-212ENST00000590530 CENPFP49454 3210 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 PPP1R3GB7ZBB8 358 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 PTMAP06454 111 aaKnown RBP18.91■□□□□ 0.62
GCDH-212ENST00000590530 CYP2B6P20813 491 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 SLC12A3P55017 1021 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 ACTR2P61160 394 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 CACNB1Q02641 598 aaPredicted RBP18.91■□□□□ 0.62
GCDH-212ENST00000590530 PRAMEF19Q5SWL8 479 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 CCDC62Q6P9F0 684 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 SMYD4Q8IYR2 804 aaPredicted RBP18.91■□□□□ 0.62
GCDH-212ENST00000590530 CCDC47Q96A33 483 aaKnown RBP18.91■□□□□ 0.62
GCDH-212ENST00000590530 TRIM47Q96LD4 638 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 SH2D3AQ9BRG2 576 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 TUFT1Q9NNX1 390 aa18.91■□□□□ 0.62
GCDH-212ENST00000590530 TNPO2O14787 897 aaKnown RBP18.9■□□□□ 0.62
GCDH-212ENST00000590530 FARP2O94887 1054 aaPredicted RBP18.9■□□□□ 0.62
GCDH-212ENST00000590530 CD44P16070 742 aaKnown RBP18.9■□□□□ 0.62
GCDH-212ENST00000590530 KRT76Q01546 638 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 RAD51AP2Q09MP3 1159 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 ARSHQ5FYA8 562 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 KCTD17Q8N5Z5 321 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 HPS3Q969F9 1004 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 BHMT2Q9H2M3 363 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 RNF186Q9NXI6 227 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 SYNRGQ9UMZ2 1314 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.9■□□□□ 0.62
GCDH-212ENST00000590530 GOLGA6L6A8MZA4 724 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 WDR64B1ANS9 1081 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 GGPS1O95749 300 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 ALDH1A1P00352 501 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 KMT5BQ4FZB7 885 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 ZNF746Q6NUN9 644 aaPredicted RBP18.9■□□□□ 0.62
GCDH-212ENST00000590530 MAMDC4Q6UXC1 1216 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 ZNF467Q7Z7K2 595 aaPredicted RBP18.9■□□□□ 0.62
GCDH-212ENST00000590530 SENP7Q9BQF6 1050 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 TINF2Q9BSI4 451 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 DNM3Q9UQ16 869 aa18.9■□□□□ 0.62
GCDH-212ENST00000590530 B4DLN1 442 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 P4HBP07237 508 aaKnown RBP18.89■□□□□ 0.61
GCDH-212ENST00000590530 CYP11B2P19099 503 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 PSMC4P43686 418 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 LACTBP83111 547 aaPredicted RBP18.89■□□□□ 0.61
GCDH-212ENST00000590530 SWSAP1Q6NVH7 229 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 ABHD15Q6UXT9 468 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 CCDC60Q8IWA6 550 aaPredicted RBP18.89■□□□□ 0.61
GCDH-212ENST00000590530 DDX12PQ92771 950 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 MED15Q96RN5 788 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 MPHOSPH6Q99547 160 aaKnown RBP18.89■□□□□ 0.61
GCDH-212ENST00000590530 RUSC1Q9BVN2 902 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 GABRQQ9UN88 632 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 DIS3Q9Y2L1 958 aaKnown RBP18.89■□□□□ 0.61
GCDH-212ENST00000590530 NFE2L3Q9Y4A8 694 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 PLXNA1Q9UIW2 1896 aa18.89■□□□□ 0.61
GCDH-212ENST00000590530 SYNGAP1Q96PV0 1343 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 ZNF862O60290 1169 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 TPM3P06753 285 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 ZNF18P17022 549 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 ADCYAP1R1P41586 468 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 ASIC1P78348 528 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 GPBP1Q86WP2 473 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 GIMAP8Q8ND71 665 aaPredicted RBP18.88■□□□□ 0.61
GCDH-212ENST00000590530 DNAJC19Q96DA6 116 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 FANCLQ9NW38 375 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 GABBR1Q9UBS5 961 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 PCDHA10Q9Y5I2 948 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 PVALEFA0A1B0GWK0 134 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 GSTTP1A0A1W2PQM5 241 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 ADCY6O43306 1168 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 TXNP10599 105 aaKnown RBP18.88■□□□□ 0.61
GCDH-212ENST00000590530 CYP2C19P33261 490 aa18.88■□□□□ 0.61
GCDH-212ENST00000590530 QARSP47897 775 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms