RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZNF449Q6P9G9 518 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 ADAM7Q9H2U9 754 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
CIRBP-228ENST00000590347 WDR35Q9P2L0 1181 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
CIRBP-228ENST00000590347 CFAP73A6NFT4 308 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 ENTPD5O75356 428 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 PLTPP55058 493 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 C1QTNF12Q5T7M4 302 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 LRIG3Q6UXM1 1119 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 PIGWQ7Z7B1 504 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 ZNF654Q8IZM8 581 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 MIGA1Q8NAN2 632 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 TMEM87BQ96K49 555 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 SCN11AQ9UI33 1791 aa16.53■□□□□ 0.24
CIRBP-228ENST00000590347 LUC7L3O95232 432 aaKnown RBP16.52■□□□□ 0.24
CIRBP-228ENST00000590347 DAAM2Q86T65 1068 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 GLG1Q92896 1179 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 PREBQ9HCU5 417 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 ARPP21Q9UBL0 812 aaPredicted RBP16.52■□□□□ 0.24
CIRBP-228ENST00000590347 ZNF232Q9UNY5 417 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 RTCBQ9Y3I0 505 aaKnown RBP16.52■□□□□ 0.24
CIRBP-228ENST00000590347 C4AP0C0L4 1744 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 C4BP0C0L5 1744 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 GRID2IPA4D2P6 1211 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 ALDH3A1P30838 453 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 ZNF662Q6ZS27 426 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 CCDC25Q86WR0 208 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 LMNTD2Q8IXW0 634 aa16.52■□□□□ 0.24
CIRBP-228ENST00000590347 HELBQ8NG08 1087 aaPredicted RBP16.52■□□□□ 0.24
CIRBP-228ENST00000590347 UTP4Q969X6 686 aaKnown RBP16.52■□□□□ 0.24
CIRBP-228ENST00000590347 A0A087X0T9 212 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 RGS16O15492 202 aaPredicted RBP16.52■□□□□ 0.23
CIRBP-228ENST00000590347 ATP6V1G1O75348 118 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 FAM228BP0C875 321 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 FGFR4P22455 802 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 SERPINB4P48594 390 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 ASIC1P78348 528 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 RAPGEF1Q13905 1077 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.23
CIRBP-228ENST00000590347 LRRC41Q15345 812 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 RPS6KA1Q15418 735 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 EAPPQ56P03 285 aaPredicted RBP16.52■□□□□ 0.23
CIRBP-228ENST00000590347 FAM182BQ5T319 152 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 MTHFD1LQ6UB35 978 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 KIF6Q6ZMV9 814 aa16.52■□□□□ 0.23
CIRBP-228ENST00000590347 MAP3K15Q6ZN16 1313 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 MBD4O95243 580 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 GH1P01241 217 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 PAEPP09466 180 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 TARSP26639 723 aaKnown RBP16.51■□□□□ 0.23
CIRBP-228ENST00000590347 NAALADL2Q58DX5 795 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 MFSD6Q6ZSS7 791 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 FBF1Q8TES7 1133 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 FERMT2Q96AC1 680 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 FGD4Q96M96 766 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 NUDCD1Q96RS6 583 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 THAP9Q9H5L6 903 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 KCNK9Q9NPC2 374 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 DNAJC17Q9NVM6 304 aaKnown RBP16.51■□□□□ 0.23
CIRBP-228ENST00000590347 SNX3O60493 162 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 STARD3NLO95772 234 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 ZCCHC18P0CG32 403 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 ALADP13716 330 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 AGBL2Q5U5Z8 902 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 ARMC9Q7Z3E5 817 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 RUBCNQ92622 972 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 RMND1Q9NWS8 449 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 INTUQ9ULD6 942 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 SNX24Q9Y343 169 aa16.51■□□□□ 0.23
CIRBP-228ENST00000590347 NOC2LQ9Y3T9 749 aaKnown RBP16.51■□□□□ 0.23
CIRBP-228ENST00000590347 SPATA31D3P0C874 917 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 UBTFL6P0CB48 400 aaPredicted RBP16.5■□□□□ 0.23
CIRBP-228ENST00000590347 SLC29A2Q14542 456 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 PKN1Q16512 942 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 MUM1Q2TAK8 710 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 SPATA31D4Q6ZUB0 917 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 RFX8Q6ZV50 586 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 SGMS1Q86VZ5 419 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 P3H4Q92791 437 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 GSTA1P08263 222 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 POLR2FP61218 127 aaKnown RBP16.5■□□□□ 0.23
CIRBP-228ENST00000590347 RCN2Q14257 317 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 IFI16Q16666 785 aaKnown RBP16.5■□□□□ 0.23
CIRBP-228ENST00000590347 FAM133AQ8N9E0 248 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 GLIS3Q8NEA6 775 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 P2RX5Q93086 422 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 UIMC1Q96RL1 719 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 HAO1Q9UJM8 370 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 MYH2Q9UKX2 1941 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 SIPA1L3O60292 1781 aaPredicted RBP16.5■□□□□ 0.23
CIRBP-228ENST00000590347 CYP2D7A0A087X1C5 515 aa16.5■□□□□ 0.23
CIRBP-228ENST00000590347 MMADHCQ9H3L0 296 aaPredicted RBP16.5■□□□□ 0.23
CIRBP-228ENST00000590347 KLRC4O43908 158 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 TLR2O60603 784 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 KLC1Q07866 573 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 MEI1Q5TIA1 1274 aa16.49■□□□□ 0.23
CIRBP-228ENST00000590347 DYMQ7RTS9 669 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms