RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ZNF215Q9UL58 517 aaPredicted RBP15.3■□□□□ 0.04
VMP1-210ENST00000589823 FRMPD3Q5JV73 1810 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 IGKV6D-21A0A0A0MT36 114 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 LGR5O75473 907 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 CABYRO75952 493 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 P4HBP07237 508 aaKnown RBP15.29■□□□□ 0.04
VMP1-210ENST00000589823 ZNF286BP0CG31 522 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 STAT5BP51692 787 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 ACLYP53396 1101 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 PURAQ00577 322 aaKnown RBP15.29■□□□□ 0.04
VMP1-210ENST00000589823 GRIN1Q05586 938 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 CCSAPQ6IQ19 270 aaPredicted RBP15.29■□□□□ 0.04
VMP1-210ENST00000589823 PDXDC2PQ6P474 469 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 PLPPR4Q7Z2D5 763 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 CCDC60Q8IWA6 550 aaPredicted RBP15.29■□□□□ 0.04
VMP1-210ENST00000589823 CKAP2LQ8IYA6 745 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 SNX29Q8TEQ0 813 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 DYDC2Q96IM9 177 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 CSRNP2Q9H175 543 aa15.29■□□□□ 0.04
VMP1-210ENST00000589823 H3BRB1 525 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 TXLNAP40222 546 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 CCT6AP40227 531 aaKnown RBP15.28■□□□□ 0.04
VMP1-210ENST00000589823 UBA7P41226 1012 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 QARSP47897 775 aaKnown RBP15.28■□□□□ 0.04
VMP1-210ENST00000589823 SLC26A2P50443 739 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 PSMC5P62195 406 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 CYP4A11Q02928 519 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 CXCL17Q6UXB2 119 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 TRIM50Q86XT4 487 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 TPH2Q8IWU9 490 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 BANK1Q8NDB2 785 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 AFAP1L1Q8TED9 768 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 VTI1AQ96AJ9 217 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 GLT1D1Q96MS3 346 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 GBP4Q96PP9 640 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 PCYT2Q99447 389 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 C16orf70Q9BSU1 422 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 POLR3CQ9BUI4 534 aaPredicted RBP15.28■□□□□ 0.04
VMP1-210ENST00000589823 TUT1Q9H6E5 874 aaKnown RBP15.28■□□□□ 0.04
VMP1-210ENST00000589823 TUFT1Q9NNX1 390 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 ERAP1Q9NZ08 941 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 RGL1Q9NZL6 768 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 PCDHA7Q9UN72 937 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 PHF24Q9UPV7 400 aa15.28■□□□□ 0.04
VMP1-210ENST00000589823 IGSF9BQ9UPX0 1349 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 KDM3AQ9Y4C1 1321 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 GOLGA6L4A6NEF3 574 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 PP2D1A8MPX8 630 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 F2P00734 622 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 MARK3P27448 753 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 RPA1P27694 616 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 CDC25AP30304 524 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 PSEN2P49810 448 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 CHMP4BP1P59074 171 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 CTTNQ14247 550 aaKnown RBP15.27■□□□□ 0.04
VMP1-210ENST00000589823 CABP7Q86V35 215 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 ZNF579Q8NAF0 562 aaKnown RBP15.27■□□□□ 0.04
VMP1-210ENST00000589823 RASSF8Q8NHQ8 419 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 CDK5RAP3Q96JB5 506 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 HSD17B14Q9BPX1 270 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 LXNQ9BS40 222 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 ZSWIM4Q9H7M6 989 aa15.27■□□□□ 0.04
VMP1-210ENST00000589823 MAFBQ9Y5Q3 323 aaPredicted RBP15.27■□□□□ 0.04
VMP1-210ENST00000589823 A0A1W2PQ45 241 aaPredicted RBP15.26■□□□□ 0.03
VMP1-210ENST00000589823 A0A1W2PQY0 241 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 SLC26A4O43511 780 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 SLITRK3O94933 977 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 MUTP22033 750 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 MFSD10Q14728 455 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 ZRSR1Q15695 479 aaKnown RBP15.26■□□□□ 0.03
VMP1-210ENST00000589823 UGCGQ16739 394 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 KIAA0753Q2KHM9 967 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 SPECC1Q5M775 1068 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 CLEC17AQ6ZS10 378 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 CATSPER3Q86XQ3 398 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 KAT2BQ92831 832 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 CALML4Q96GE6 196 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 FAM167AQ96KS9 214 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 STARD7Q9NQZ5 370 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 FAM13BQ9NYF5 915 aa15.26■□□□□ 0.03
VMP1-210ENST00000589823 CCDC85CA6NKD9 419 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 ZNF862O60290 1169 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 MED24O75448 989 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 SPATA31C1P0DKV0 1188 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 EN2P19622 333 aaPredicted RBP15.25■□□□□ 0.03
VMP1-210ENST00000589823 PRKCEQ02156 737 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 PLCB4Q15147 1175 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 XKR3Q5GH77 459 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 AXDND1Q5T1B0 1012 aaPredicted RBP15.25■□□□□ 0.03
VMP1-210ENST00000589823 ADALQ6DHV7 355 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 TRMT1LQ7Z2T5 733 aaKnown RBP15.25■□□□□ 0.03
VMP1-210ENST00000589823 C4orf19Q8IY42 314 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
VMP1-210ENST00000589823 EPSTI1Q96J88 318 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 MMTAG2Q9BU76 263 aaKnown RBP15.25■□□□□ 0.03
VMP1-210ENST00000589823 CCSER1Q9C0I3 900 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 NT5C3AQ9H0P0 336 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 NRBP2Q9NSY0 501 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 CCDC39Q9UFE4 941 aa15.25■□□□□ 0.03
VMP1-210ENST00000589823 TRPC6Q9Y210 931 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms