RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 SPTLC1O15269 473 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 FOXN1O15353 648 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 ADCY6O43306 1168 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 CHMP2AO43633 222 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 NEMFO60524 1076 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 SNAI1O95863 264 aaPredicted RBP6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 FOSP01100 380 aaPredicted RBP6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 MYCP01106 439 aaPredicted RBP6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 CYP3A4P08684 503 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 OR52Z1P0C646 297 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 ELNP15502 786 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 LIG1P18858 919 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 CCND2P30279 289 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 MCM4P33991 863 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 COPB2P35606 906 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 TECP42680 631 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 FLT3LGP49771 235 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 ATP2C1P98194 919 aaPredicted RBP6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 SP2Q02086 613 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 ITGB3BPQ13352 177 aaPredicted RBP6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 CALCRLQ16602 461 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 AXDND1Q5T1B0 1012 aaPredicted RBP6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 PCNX4Q63HM2 1172 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 ZNF385CQ66K41 422 aaPredicted RBP6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 SHC4Q6S5L8 630 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 PPP1R13LQ8WUF5 828 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 USP6NLQ92738 828 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 MBOAT7Q96N66 472 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 PANK2Q9BZ23 570 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 GLT8D2Q9H1C3 349 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 LMBRD1Q9NUN5 540 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 POLR3EQ9NVU0 708 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 RCOR1Q9UKL0 485 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 ZHX1Q9UKY1 873 aaPredicted RBP6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 PNMA2Q9UL42 364 aa6.82□□□□□ -1.32
CAPNS1-208ENST00000589162 A0A087X0B3 334 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 A0A1B0GVL5 298 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 EML1O00423 815 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 MEIS1O00470 390 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 MARCH6O60337 910 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 FKTNO75072 461 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 YEATS4O95619 227 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 CCNYL3P0C7X3 344 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 EDNRBP24530 442 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 CIITAP33076 1130 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 RGS2P41220 211 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 ADCYAP1R1P41586 468 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 TRAPPC10P48553 1259 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 USP11P51784 963 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 MTMR1Q13613 665 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 ZRSR1Q15695 479 aaKnown RBP6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 LY6KQ17RY6 165 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 Q4G0T1 1027 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 CEP55Q53EZ4 464 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 NCAPH2Q6IBW4 605 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 PTCRAQ6ISU1 281 aaPredicted RBP6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 CLEC17AQ6ZS10 378 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 TRMT1LQ7Z2T5 733 aaKnown RBP6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 VSIG10LQ86VR7 867 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 FAM177A1Q8N128 213 aaPredicted RBP6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 FSIP1Q8NA03 581 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 TRPV1Q8NER1 839 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 ETNPPLQ8TBG4 499 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 FAM174AQ8TBP5 190 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 GPT2Q8TD30 523 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 LRRC15Q8TF66 581 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 TRIB2Q92519 343 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 EPSTI1Q96J88 318 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 GBP4Q96PP9 640 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 MTMR9Q96QG7 549 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 ZNF577Q9BSK1 485 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 KLF16Q9BXK1 252 aaPredicted RBP6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 KATNBL1Q9H079 304 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 UNC45AQ9H3U1 944 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 TTC12Q9H892 705 aaPredicted RBP6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 EHMT1Q9H9B1 1298 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 AGO4Q9HCK5 861 aaKnown RBP6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 KCNMB3Q9NPA1 279 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 JADE2Q9NQC1 790 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 KCNH7Q9NS40 1196 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 ADD3Q9UEY8 706 aaKnown RBP6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 CFAP45Q9UL16 551 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 ATP6V1DQ9Y5K8 247 aa6.81□□□□□ -1.32
CAPNS1-208ENST00000589162 CYP3A7-CYP3A51PA0A087WV96 503 aa6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 SOBPA7XYQ1 873 aa6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 DHX15O43143 795 aaKnown RBP6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 STRNO43815 780 aa6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 ARHGEF15O94989 841 aa6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 CCNE2O96020 404 aa6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 HSPA1AP0DMV8 641 aaKnown RBP6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 HSPA1BP0DMV9 641 aaKnown RBP6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 HSPA8P11142 646 aaKnown RBP6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 KCNA2P16389 499 aa6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 UBA1P22314 1058 aaKnown RBP6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 CYP3A7P24462 503 aa6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 CCND3P30281 292 aaPredicted RBP6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 KIF22Q14807 665 aa6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 KARSQ15046 597 aaKnown RBP6.8□□□□□ -1.32
CAPNS1-208ENST00000589162 STXBP2Q15833 593 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms